| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1184 |
|---|
| Symbol | |
|---|
| ID | 5055526 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | - |
|---|
| Start bp | 1072366 |
|---|
| End bp | 1073256 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640468734 |
|---|
| Product | lipoyl synthase |
|---|
| Protein accession | YP_001153407 |
|---|
| Protein GI | 145591405 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0320] Lipoate synthase |
|---|
| TIGRFAM ID | [TIGR00510] lipoate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0667385 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.0581993 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGC TTCCGGCGTG GCTGAGGGTT GAGGCAAGGA GCTACAGCGA GATGGCCAAG
GTTAGGTCGG TGCTGAGCCG GCTGGGTGTC TACACCGTGT GCGAGGGGGC GAGGTGCCCC
AACGTCTTCA GATGCTGGGG GGAGGGCACC GCCACCTTTA TGATCCTAGG CGAGGTGTGC
ACCAGGGCGT GTAGGTTCTG CTCCGTGAGG ACGGGCAACC CAAGAGGCTA CGTGGACTTG
GACGAGCCCA GGAGGGTGGC CGAGGCTGTG AGGAGGCTTG GGTTGCGGTA CGTGGTGGTG
ACCTCCGTGG ACAGAGACGA CTTGCCGGAC GGAGGCGCCT TCCAATACGC CTCGGCGATT
AGGGAGATAC GAAGGCTTGC CCCCGGCGCC TTGGTCGAAG TGCTGACGCC GGATTTCAGA
GGCTCCAGAG AGGCGGTGGA GACCGTGGCC GAGGCGGGGC CCGACGTCTT CGCCCACAAC
GTGGAGACCG TGAGGAGGCT AACGCCCTTG GTTAGAGACA GAAGGGCATC CTATGAGACC
TCGCTACGCG TGTTAAAGAC TGCGAAGGAG GTGGGTTGCA GGTTGACCAA GTCCGGAATA
ATGCTAGGCC TGGGCGAAAG CTTCGATGAG GTGGTGGAGG TTCTCGACGA CTTGAGGAAG
GCGGAGGTGG ACATAGTGAC CATAGGCCAA TACGTGAGGC CTACCAAAAG CGCCCGCCAT
TTGCCGGTGG CGAGGTGGGT GCCCCTCGAG GAGTTTCAAA AGCTGGGCGA GGTGGCTCTC
TCCATGGGGT TCAAGGCCGT GGCATCAGCG CCTCTGGTCA GGAGCTCCTA CAGAGCCGAG
GATCTATACG AAATGGCCCT AGGCCTTAGG CCAAGGGCCG TATTGGTATG A
|
|---|
| Protein sequence | MSALPAWLRV EARSYSEMAK VRSVLSRLGV YTVCEGARCP NVFRCWGEGT ATFMILGEVC
TRACRFCSVR TGNPRGYVDL DEPRRVAEAV RRLGLRYVVV TSVDRDDLPD GGAFQYASAI
REIRRLAPGA LVEVLTPDFR GSREAVETVA EAGPDVFAHN VETVRRLTPL VRDRRASYET
SLRVLKTAKE VGCRLTKSGI MLGLGESFDE VVEVLDDLRK AEVDIVTIGQ YVRPTKSARH
LPVARWVPLE EFQKLGEVAL SMGFKAVASA PLVRSSYRAE DLYEMALGLR PRAVLV
|
|---|
| |