Gene Pars_1154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1154 
Symbol 
ID5054828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1044021 
End bp1044464 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content59% 
IMG OID640468705 
ProductDNA polymerase beta subunit 
Protein accessionYP_001153379 
Protein GI145591377 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.855122 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0599495 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCCGCGC CAGGTAGTAC GCCAAGGAGA TTAAGAATAT GCATAGAGGA GTTTGACTGT 
AGCTACAGAG TTATTCTCTT AGGGTCGGTC GCCAGGAGGG ACTACAGAGT CGACAGCGAT
ATCGACGTGT TGGTGATAAC CGAGCTCGCG GAGGATACGT GGAAGAGAGC CGAGATAGCC
TTGAGGATAC GGGAGAGGCT GGGCTTCGGA GACCCCTTGG AGCTCCACAT TAGTGACGCC
GAAGATCTTC GACGAGTGGT ACAAGAAGCT GATAGACGCC TACGAGGAGT TCTGACGAAC
AGATTACAGC GCGCGTCGCG CCGGCCGCCG ACCTCGCAGG GGGCTCCGGA ACCCGTTGAG
GGAGGGCGCC TCTTCCGGCG TCGCCGCACG GAGACTAACG GCCCTCCTCC CGCTGGCCTC
CGCCGTATAG CTCGTACGCC CTGA
 
Protein sequence
MSAPGSTPRR LRICIEEFDC SYRVILLGSV ARRDYRVDSD IDVLVITELA EDTWKRAEIA 
LRIRERLGFG DPLELHISDA EDLRRVVQEA DRRLRGVLTN RLQRASRRPP TSQGAPEPVE
GGRLFRRRRT ETNGPPPAGL RRIARTP