Gene Pars_1104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1104 
Symbol 
ID5055479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp989805 
End bp990554 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content57% 
IMG OID640468660 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001153334 
Protein GI145591332 
COG category[R] General function prediction only 
COG ID[COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.342626 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACATTC ATATTTTGGG CTCGGGGGCT GGCGGTAGCC CCGGCTCGCG GAGGTGGAGG 
GCGGCCAACT TAGTCGAGGC CAACGGCTAC TTAGTTGTCG TGGACTGCGG TGTTGGTTGT
CACTACCGCC TTTCTGACCG AGGGGTACTC GGGGAGGTGG ACTACGTCTT TATTACCCAC
AGCCACATGG ACCACTTCCT CGGCCTGCCC GAGGCGCTTT TCCAAGCCCA CATCGAGGAG
AGGAAGAAGC CCATCACCAT ATTCGCCCCC AGTAGGGTTG AGGATACTAT TAGAGCCGCC
GCGCCCCACG TTTTGACAAA TATGCGGTAT GCTGTCAATA TCAAGAGGAT AGAGCCTGGT
GTTCTTCTAG AAGTCCCAGG TCTTAGAGTG GAGGCTGCCC CGGCTTGTCA CCACACAGCA
GAGGAGGCCT ACGGTTTTAG GATTAGGGCT GATGTCGATG TGTTTTTTAC AGGCGACACG
GCGCCTGGCT GTACGTCTCT TGAGAGACTG GGGGAGGGGG TAGACGTGTT GATACATGAG
GCTACCTGCA ACGAGGATTA CCGCGAGATC TGCGCCAAGT ACGCCCACGC CACGACGTTT
CAAGCTCTGG CAGAGGCCGA AGTGATGATG GCGGAAAACC TAGTCCTAAA CCACATAGAC
GAGAGGTTTA ACCCGACCGT CTACAGAGAC GTGAGGAGGG CAGGCCGCCC GGCGGTAGTG
GCCGAGGACA ACATGATCCT CAAGTTCTAA
 
Protein sequence
MYIHILGSGA GGSPGSRRWR AANLVEANGY LVVVDCGVGC HYRLSDRGVL GEVDYVFITH 
SHMDHFLGLP EALFQAHIEE RKKPITIFAP SRVEDTIRAA APHVLTNMRY AVNIKRIEPG
VLLEVPGLRV EAAPACHHTA EEAYGFRIRA DVDVFFTGDT APGCTSLERL GEGVDVLIHE
ATCNEDYREI CAKYAHATTF QALAEAEVMM AENLVLNHID ERFNPTVYRD VRRAGRPAVV
AEDNMILKF