Gene Pars_1083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1083 
Symbol 
ID5055019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp970551 
End bp970967 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content59% 
IMG OID640468639 
Producthypothetical protein 
Protein accessionYP_001153313 
Protein GI145591311 
COG category[S] Function unknown 
COG ID[COG4933] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.299063 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTATCT ACCTAATGTC GATAAAGCCG AGATTCGGCG ACGAGATCCT ATCCGGCTCT 
AAGAAGTACG AGTTGAGGAG GCTGGTGGGC CCCCTCGTCG AGCTTGGGGA CGTGGTTTAC
CTCTACTTCA CCAGGCCTGT GTCGGCAGTA GCGGGGAGGT TCACGGCGGG GTTGGTATTC
ATAGTCCCGC CCGAGAACTT GGGCAGGCTC CTCGCAGAGC TGGGCGACGT GGGCATCGGC
GAGGACGACT TGAAGTACGT GGAGGGGGCG AGATACGCCA TGTTGATACA AGTGAGGAAT
CCGGCTAGGT GCCGCGCGGC GGTGAGGCTC TCCGAAATAG GCGAGCCTCC GCCTCCGAGC
TACAGAAAAA TCGCGAAGAA GAAGGCTGAG CAACTGGCTA CCCTCTGCGG CTTTTAG
 
Protein sequence
MAIYLMSIKP RFGDEILSGS KKYELRRLVG PLVELGDVVY LYFTRPVSAV AGRFTAGLVF 
IVPPENLGRL LAELGDVGIG EDDLKYVEGA RYAMLIQVRN PARCRAAVRL SEIGEPPPPS
YRKIAKKKAE QLATLCGF