Gene Pars_1082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1082 
Symbol 
ID5055631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp969736 
End bp970506 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content62% 
IMG OID640468638 
Producthypothetical protein 
Protein accessionYP_001153312 
Protein GI145591310 
COG category[S] Function unknown 
COG ID[COG2445] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.167925 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.321857 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTGCA TGCGTCTTAG AGAGCAGTTA GCCCGCGTAC GCAGGTATGC GGAGCTCTTG 
GCGGAGAGGC TGGAGGCGGG GGGTGACATC TTCGCCTTGG AGCGTCTGGC GGAGCTGGTG
GCCCAGTCCA CCCTGGATCT CGCCGCGATG TGGCTCGCCG CGGAGCGGGG CGAGAAACCT
GCCACGTACA GGGAGGTGGC GAGATTCCTC GCCAAGAAGG TCGGGGGCTA TGAGGACTTT
CTAGTAAGGC TTGCCGCGTT CCGGAATATC ATCGTCCACG GATACTACAG CTTGGACGAG
AAAAGGGAGC TTGAGGCTTT TAGGGAAATC GCCGCGATGA TGCCTGATCT CCTCAACGCT
GTGGAGTCTA AGTTGCCGGA CGACCCATGC ATCGGCGATT TGAAGGGCCT TGAGCCCGTG
TTCGAGAAAC ACGGCGTGGA GTACGCTGTG GTCTTCGGCT CCTTGGCGAA GAAGGGCTGC
GGCCGGGATG TCGACCTTGC AGTGAAGTTT AGGGAGGAGA AGGGGCTTTG GGGCTTGGCT
GCGCTGGTGG CGGACGTGGC CGATGCCCTT GGCCTAGACT ACTGCCAGGT AGACGTGGTG
GACGTAGACG CGGCGCTGCC GGCGTTGCTA CTCTCAGTGC TGGAGGGAGT GCCGATATAC
AACGCAGAGC GGGCCCGGGA GGACCTCACG TGGAGGTACA TCGAGCTCCT CGACGTCGGC
GAGACTTGGG AATACGCCAA CCGGCGGATT ACCCCTCGGC CCCGCTCGTA G
 
Protein sequence
MFCMRLREQL ARVRRYAELL AERLEAGGDI FALERLAELV AQSTLDLAAM WLAAERGEKP 
ATYREVARFL AKKVGGYEDF LVRLAAFRNI IVHGYYSLDE KRELEAFREI AAMMPDLLNA
VESKLPDDPC IGDLKGLEPV FEKHGVEYAV VFGSLAKKGC GRDVDLAVKF REEKGLWGLA
ALVADVADAL GLDYCQVDVV DVDAALPALL LSVLEGVPIY NAERAREDLT WRYIELLDVG
ETWEYANRRI TPRPRS