Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_1048 |
Symbol | |
ID | 5055603 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | + |
Start bp | 933883 |
End bp | 934746 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640468604 |
Product | Fis family transcriptional regulator |
Protein accession | YP_001153278 |
Protein GI | 145591276 |
COG category | [S] Function unknown |
COG ID | [COG2512] Uncharacterized membrane-associated protein/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.246642 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTAGTCT TCCTCAACTT AACCGCTCCC CCACTCCTCC TACTATTACT CCCCGCGGCG CTGGTGGGCA ACTACACGCT ACCAGCACCC CCGCTTTCAG ACGTGGCGGC CTTCACCACT GCCGGGGAGC CCCTTCCCAC CTGGGTGCTT AACAACACCC TCTACGTCTT ACAAAACGGG GCCCCCGCAG TGGCCGTTTA CGTCCCCCGT TACGAGAACA GCAGCGGCGT CTACACAGTC ACAGTCAAGG CCGACAAGGT GGTCGTCCAG GCGCCCCCCG GCGTTATGAT AGAGGACTTC GCCCCACTTC CCACAAACGT GGTTGTCAAT AAAACCGGCC TCTACCTCTA CTTCACCGGC GAAGTCCGAG TAAAGTACTA TTTCTTCTCA ATAATAACCA TCAAGCCCCC GCCCACGCCG ACCGCTACAC AAACGACGAC CACCACGACA GCCCCGCCGT CCCCCACACC GCCTCCCACA TCTACGCAAC CCTCCACATC TGCTCCCACC GGCACATCGC CACCTGGCAC AACCACCACG ACCACCCCCG CGCCGGCGGC GGGTGTTGAT ATGTGGCCCG TGGTGGGGTT GGCCGTGGCG GCCGCCGTGG CGGCCGGCGT CTACTTCCTC TTCAAGAGGA GGCCGAGCGG CGGAGACTGC GGAGAGCTCA CCGACGTGGA CCGCGTCGTG TTGCAAGCTC TGGCAAACAT GGGAGGCTCT GCCGAGAGGA CGCAACTACA GAACGCCCTA GGCGTGCCGA AGACGACGCT GCACCGGCAC CTCCACAAAT TAGCCAAATA CGGCTACGTC AGGTTGGTAC AGGAGGGCGG GAGGCAGAGA GTAGAGCTTC TAAGAAAGTG TTGA
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Protein sequence | MLVFLNLTAP PLLLLLLPAA LVGNYTLPAP PLSDVAAFTT AGEPLPTWVL NNTLYVLQNG APAVAVYVPR YENSSGVYTV TVKADKVVVQ APPGVMIEDF APLPTNVVVN KTGLYLYFTG EVRVKYYFFS IITIKPPPTP TATQTTTTTT APPSPTPPPT STQPSTSAPT GTSPPGTTTT TTPAPAAGVD MWPVVGLAVA AAVAAGVYFL FKRRPSGGDC GELTDVDRVV LQALANMGGS AERTQLQNAL GVPKTTLHRH LHKLAKYGYV RLVQEGGRQR VELLRKC
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