Gene Pars_1046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1046 
Symbol 
ID5056351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp931861 
End bp932796 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content58% 
IMG OID640468602 
Productaminotransferase, class I and II 
Protein accessionYP_001153276 
Protein GI145591274 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.326477 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.81687 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGACAT TTAAGTGGAT AAGGGAGAAA ATCGCAGATT ATGACCTCGC CAACAGTGGG 
GTGGCGAAGC TCAACGCCTT CGCCCGTGGC GATGCGCCGC CTCTCGAAGA TGTGCTTTCT
GATCTTTACG GCGTTTCAAA ACAAGAGCTC GTCCTCACCG CTGGGGCCCA AGAGGGGGTG
TTCCTGGCAT TTCTAGCGAT CAAGCCAAGC TACGTAGTAA CCGTGGTGCC GGAGTACGAG
CCGATTACAA AACTCCCCCA GACCCTCGGC GTGAGGCAAG TGCAAGTTGG GAATGTCTGG
GACGCCCCAC TAGAGCCAGG CGGCCTCATC CTCCTCTCAA ACCCAAATAA CCCCACAGGC
CGCTTTCTCG ACAAGAGGGA GCTTGCGGAG CTTGCGGACG AGGCGTGGAG GAGGGGGGCC
TATCTCGTCG TCGACATTAT ATTCTCAGAC TTCGTAACAG ACGACGTTAA GGAGCTCCCA
CTGGAGGGCG TCGTGTACGC CCACAGCACG GACAAATTCT TCACCTCGGA CATACGGGTG
GGGTGGGCCT TCGGCGATAG AAGGATCGTG GAGAAAATCC GCTATCTCAA AGACTTGGCA
AACCCCGGTC CCCGGGAGTT CGAGAAGAGG GCCGCGGCGT GGCTCGTATC TAGGAGGGGC
GAGGTGAAGA GGAGAAATCT TTCCATAATT AGGCCCAACG CGGAGGCTCT CCTCGCGGCC
TTCCCAAACG CAGTATATAG GCCTGACATG CCCATCGCGT TGGTGCCGAC GAAGTGCCAC
GACGTGGAGC TAGCAGAGAG GCTACTGGCT AAGGGGGTGA AGACAGTGCC AGGCCGCTTC
TTCCAAGCCC CCTATTCGAT TCGGGTCGGC CTCGGCGTGG AGGAGCCGGA GAGGTTTAGA
GAGGCCTTGA GGATTTTAGT AGAAAGCTGG TGCTGA
 
Protein sequence
METFKWIREK IADYDLANSG VAKLNAFARG DAPPLEDVLS DLYGVSKQEL VLTAGAQEGV 
FLAFLAIKPS YVVTVVPEYE PITKLPQTLG VRQVQVGNVW DAPLEPGGLI LLSNPNNPTG
RFLDKRELAE LADEAWRRGA YLVVDIIFSD FVTDDVKELP LEGVVYAHST DKFFTSDIRV
GWAFGDRRIV EKIRYLKDLA NPGPREFEKR AAAWLVSRRG EVKRRNLSII RPNAEALLAA
FPNAVYRPDM PIALVPTKCH DVELAERLLA KGVKTVPGRF FQAPYSIRVG LGVEEPERFR
EALRILVESW C