| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1006 |
|---|
| Symbol | |
|---|
| ID | 5056082 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | - |
|---|
| Start bp | 897984 |
|---|
| End bp | 898844 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640468564 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001153238 |
|---|
| Protein GI | 145591236 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3342] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.728263 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATTTT CCATAGTGGC AACAGATGGG GTTGATGTCG GGGTGGCTGT CGCGTCTAAG
TTCGTCGCTG TGGGTGCCTT CGTCCCCCAC GCGGAGGCCT CAGTAGGCGC GGTGGCCACC
CAGTGCTACG CGAACCCCTC CCTTGGGAGG ATCATCCTCT CGGCGATGAG AGGCGGATCA
ATAGCAGAGG AAGCTGTGAG AAGGGCCCTT GCCCAGGATC CAGATAGAGA GCAGAGGCAG
ATCGGCGCCG TGGACATCAG GGGGAACGCC TACGCCTTTA CGGGGAGGGC TTGTCCAGAA
TACGCAGGGC ACGTCGTGGG TAGTGGCTAC GCAGCTCAGG GAAACATCTT AGCGGGGCCG
GAGGTGGTGG AGGCGATGGC AAAGGCCTTT GAGACGCAGC GGGGCGAGCT GGTGGACAAG
CTCCTAGCCG CCTTGGAGGC GGGGGAGAAG GCCGGCGGCG ATAGGCGTGG GAAACAGTCG
GCCGCCCTCG TCGTCCTTAG ACCACGCGGC GGCTACCTAG GCCTCACAGA CGTATACGTG
GACATAAGAG TAGACGACCA CCCAGAGCCC GTCGCCGAGC TTAGACGCAT CTTTAGGATA
TGGGAGCTGA CGCTGTTGCA GAGGGACGAC CCTACCGACG TGGTGTCGAA GAAGGACGTG
GCAGGCGAAG TGCAAGAGGC ACTCAGGAGG CTGGGGTTCT ACAGAAAGGA ACCCACCGGG
GTGTGGGACG AGGAGACCGA GGCGGCGTTT AGGGAGTGGG CAGGATTCGA AAACTTCGAG
AACAAGATCA GAGACGACGA CAAGATATGG GGATCGGTAT ACCGGTATCT TTTAGAAAGG
GGGCGTCAAG TCCACCGGTA G
|
|---|
| Protein sequence | MTFSIVATDG VDVGVAVASK FVAVGAFVPH AEASVGAVAT QCYANPSLGR IILSAMRGGS
IAEEAVRRAL AQDPDREQRQ IGAVDIRGNA YAFTGRACPE YAGHVVGSGY AAQGNILAGP
EVVEAMAKAF ETQRGELVDK LLAALEAGEK AGGDRRGKQS AALVVLRPRG GYLGLTDVYV
DIRVDDHPEP VAELRRIFRI WELTLLQRDD PTDVVSKKDV AGEVQEALRR LGFYRKEPTG
VWDEETEAAF REWAGFENFE NKIRDDDKIW GSVYRYLLER GRQVHR
|
|---|
| |