Gene Pars_0840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0840 
Symbol 
ID5054758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp746012 
End bp746719 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content59% 
IMG OID640468401 
Product5-formyltetrahydrofolate cyclo-ligase 
Protein accessionYP_001153078 
Protein GI145591076 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0212] 5-formyltetrahydrofolate cyclo-ligase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.351261 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATAC GTGAGAGGAT ATGGCGCCTC ATGGAGGAGC GTGGAGTGGC GGCTTTCCCC 
CGACCCGTGT ACGGTCGAAT ACCTAACTTC AGGGGGGCCG AGAAAGCATG CGAGAATTTG
GCAAGACTGG ACGTCTTTGC CAAAGCCGCC GTGGTTAAGG TAAATCCCGA CGCGCCGCAG
AGGCCCTGCC GCGAGGCCGC CCTCGCCGCC GGGAAGAAGC TAATTATGCC GACTCCGAGA
ATCAGGGAGG GATTCCTTTT CCTAGACCCA GCCCTTATCC CCAAAAGCGC CTACCGCGAG
GCGTCTACAA TCGGAGGCGC CTTCAAGTGG GGGAGGCCAG TAAAGCCCTG GGATCTCCCC
CGCGTAGACC TGGTGATAAT CGGCTCGGTG GCGGTCAATC CCACCACCGG CCGGCGGCTC
GGCAAATCCC ACGGCTACGC CGAAATAGAG TGGGGCATCT TAACAGCCTT AGGCAAGGCA
GGCGAGGACA CGCCCATCGC AACCACGATC CACGACGTGC AACTGGTAGA AGACGATATC
CCGCGGGAGC CCTTCGACCT CCCCGTCGAC GTCATTACAA CGCCGATGCG CGTAATACAT
GTCAATAGGG TTGACAAGAA GCCCGCCGGC ATCTTCTGGG AGTACGTAAC AGATGAAATG
CTTAGGGAAA TCCCCTTGCT CGCAGAGTTG AAAAAGCTAG GTAAGTAG
 
Protein sequence
MAIRERIWRL MEERGVAAFP RPVYGRIPNF RGAEKACENL ARLDVFAKAA VVKVNPDAPQ 
RPCREAALAA GKKLIMPTPR IREGFLFLDP ALIPKSAYRE ASTIGGAFKW GRPVKPWDLP
RVDLVIIGSV AVNPTTGRRL GKSHGYAEIE WGILTALGKA GEDTPIATTI HDVQLVEDDI
PREPFDLPVD VITTPMRVIH VNRVDKKPAG IFWEYVTDEM LREIPLLAEL KKLGK