Gene Pars_0714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0714 
Symbol 
ID5055705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp635657 
End bp636079 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content60% 
IMG OID640468271 
Productantibiotic resistance (efflux) protein, conjectural 
Protein accessionYP_001152952 
Protein GI145590950 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.311349 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTCCG ATATATCGTA TAACTTAAAG TACGCCTGGA GGGCTCTGCC GGTGTTGGGG 
TCTGTGGCTC TCCTTGTGAT GTATACAGAG GCGATGCTTA TGCCATCTCT GCCAAGCATC
CAGGCGGAGT TCGGCGTGAC CCCCGCCGAG GCTTCTTGGG TACTCTCGAT ATACCTCATA
CTGGGCACCA TCAGCGCGGC CGTGCTCGGG AGCCTCGGCG ACATGTACGG GAAGAAGAAA
ATGCTTGTCC TCGCCCTCTC CATATACTCA GTCGCCGTCA CGTTGACCGG ATACGCTCCC
ACCTTCCACC TCCTCCTCTT GGCGAGGGCT CTCCAGGGGC TCGGCATGGC CATGTTCCCG
CTGGCCTTTT CCCTCATTAG GGAGGAGTTG CCGTGGCCCC GGCTGTGGCG GGCGCCGTCT
TGA
 
Protein sequence
MDSDISYNLK YAWRALPVLG SVALLVMYTE AMLMPSLPSI QAEFGVTPAE ASWVLSIYLI 
LGTISAAVLG SLGDMYGKKK MLVLALSIYS VAVTLTGYAP TFHLLLLARA LQGLGMAMFP
LAFSLIREEL PWPRLWRAPS