Gene Pars_0647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0647 
Symbol 
ID5055310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp575989 
End bp576453 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content51% 
IMG OID640468207 
ProductNADH dehydrogenase subunit I 
Protein accessionYP_001152890 
Protein GI145590888 
COG category[C] Energy production and conversion 
COG ID[COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.413211 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGGTGA GCAAGATTAT AAAGGCTACT ATAGACGCCA TGGCGGTTGC GGCGAAGAAT 
TTCGCCAAGC CGGAGCGCAT TACTATATAC TACCCCTACG AGAAGCTTGA GTACGTGAGG
ATGCGCGGCT GGATTGGCCT ATGGACTGAG AAGTGTACGT CGTGCATGCT GTGCGCCCGT
ATATGCCCCA CAAACGCCAT CAAGATGTAT CTGGCCCCTA ACAACAAGAG ATACCCCGGC
ATAGACTACG GCCGTTGCAT TATGTGCCAC TTCTGTATCG ACGTGTGTCC CACTGACGCC
CTCTACGGCA CCGGGATCAA GGAGCTAGCT TGGTATGACT ACAAAGAGAT GATATATACT
CCCGACATGG AAAGAGAGCC CCCGAAGGTG CAAGAACCGT ACAAATATGT AAAGGTCGCC
ATTAAATACG CTGGCGGAGT CCCGAAAAAA GTTAAGGTCG ATTAG
 
Protein sequence
MGVSKIIKAT IDAMAVAAKN FAKPERITIY YPYEKLEYVR MRGWIGLWTE KCTSCMLCAR 
ICPTNAIKMY LAPNNKRYPG IDYGRCIMCH FCIDVCPTDA LYGTGIKELA WYDYKEMIYT
PDMEREPPKV QEPYKYVKVA IKYAGGVPKK VKVD