Gene Pars_0643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0643 
Symbol 
ID5054438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp572644 
End bp573237 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content59% 
IMG OID640468203 
ProductABC transporter related 
Protein accessionYP_001152886 
Protein GI145590884 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGTCG CTAGGGGGGT CGGCAAGAGG TTTGGGGATA GGTGGGTGTT CAGAGGAGTG 
AACCTAGTGG TGCCCAGAGG CGTCCAGGTA GCCGTAGTTG GACCCAACGG CTCTGGCAAG
ACCACACTCC TAAAAATACT CGCCGGTCTG TTGAAGCCAG ACGAGGGGGT AGTAGAGGTG
GGCGGAGGGA GGCACCGGCC GGGCGAGGTG CTCTACGCAC ACCAGGAGCC TGTGGTTCTC
AGAGGCACTG TGCTGGACAA CCTCTCGCTG TGTCCAAGTC TGGACTGGGA GATAGTGGAG
GCTCTAGGAC TTAAGCCTGT TATAAGAGAA AAGGCCGCAA AGCTGTCGGG CGGGTACAAG
AAGCTCGTGA CAATAGCCCG CGTCGCCGCA TGTAGGCCGG CCGTTGCCCT ACTAGACGAG
CCTACCGCCT TTCTCGACAA GGAGAAGCGC GCCGCAGTGC GGACAGTCAT CGAAGAGCTG
ACAAGAAGCG GAAGCGCCGT GATCTGGACG ACGCATTACC CGGCGGAGGT CGATAGCGTA
GCTACCCTTT ACGAGCTAAT AGACGGCGCA CTGAGACCCG TAAGCTTACC CTAG
 
Protein sequence
MIVARGVGKR FGDRWVFRGV NLVVPRGVQV AVVGPNGSGK TTLLKILAGL LKPDEGVVEV 
GGGRHRPGEV LYAHQEPVVL RGTVLDNLSL CPSLDWEIVE ALGLKPVIRE KAAKLSGGYK
KLVTIARVAA CRPAVALLDE PTAFLDKEKR AAVRTVIEEL TRSGSAVIWT THYPAEVDSV
ATLYELIDGA LRPVSLP