| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_0542 |
|---|
| Symbol | |
|---|
| ID | 5056369 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | - |
|---|
| Start bp | 486603 |
|---|
| End bp | 487739 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640468104 |
|---|
| Product | methane/phenol/toluene hydroxylase |
|---|
| Protein accession | YP_001152789 |
|---|
| Protein GI | 145590787 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0947319 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.353657 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTATTTA GAGCTATGAG CTGGGACGAG GTGTATAAAA GGATATTCGC CAAGGCGTCG
ATGACCGAGA AGTTCTTTAG AGATAGGGAA TACGCCGGCT ATAAGAGAAC TTGGATTACC
TGGCCGATGT TGGAGAGGAA AATCGGGAGG AGGAGGCCGT CTGAGTATCA AGTCGTCTCC
TACGCGCTGT CTTACTGGTC TCCCGATCCA AACTCGCCCA CATACCGCTA CCTCGGAGCG
CCCTTTGAGC TAAGCCCCAC TCACCACATC CAGAAGTGGT ATATATACTT CAGAGATAAA
TCGCCGTTAG TCAAGGCGGT CGTCGAGGCG GGAGGGTGGC ATGACTACAG CGATCCGCAC
GAAATTGTGT ATTGGAAGTA TAATGCTATG ATGGACGAAG AGGAGACCGT TGTGGACGGG
CTGTTGGAAC AGATAGTTAA GACTAAACAC GACACGATGC TGTCAGAGGA CATGCTTAAA
TTCTACAGGG ATTACTACGA CCCGCTGAGG TTTATTTGGC ACGCCCTTCA GATGCACTGC
GCATATCTGG GCCAGATGGC CCCCACCAGC ACTGTGATTA ACATATTCAC CTTCATGGCC
ATGGACTACC TCAGGAGGGC GCAGAGAGTG GCGCAGAGGA TAAAGATGTT AGACATCGTC
TACCCTGGAT ACGGCTTCGG CGCCTATGGG AGGCAGAAAT GGGAGGAGGA TCCCGCCTAT
CAGCCCCTTA GGCAAGCCGT GGAACAGATG TTAGTGGCAT ACGACTACAC AGAGGCGTTG
GTCTCATTCG CCCTAGCTAT AAAGCCGGCT GCCGACATTG CCCTTTTAGA ATATTACGGC
AGACTCGCAG ATCTCAACGG CGATAAATAC CTCTACCAGA TACATCTATC CTTCTTAAAG
GACTCCCAGA GGCATCAAGA TCAGCTGGTC GCCCTCTTTA AATACGCCTT TGAGAGGGCG
CCTTCAACAA AAGACATAGT GAGATCTCAA TTAGGGCGTT GGAGAAATGC CGCGGAGGCC
TCCGTGCGGG GGCTAAGGCC TGTTTTTGAG TCTATGCCAG TGAAAATACC AGTGGACGAG
GTAGTAGATA GCGTAAAGGC GAAATTCCGC GAGCTAGATT CGGCGATAGG GCTATGA
|
|---|
| Protein sequence | MVFRAMSWDE VYKRIFAKAS MTEKFFRDRE YAGYKRTWIT WPMLERKIGR RRPSEYQVVS
YALSYWSPDP NSPTYRYLGA PFELSPTHHI QKWYIYFRDK SPLVKAVVEA GGWHDYSDPH
EIVYWKYNAM MDEEETVVDG LLEQIVKTKH DTMLSEDMLK FYRDYYDPLR FIWHALQMHC
AYLGQMAPTS TVINIFTFMA MDYLRRAQRV AQRIKMLDIV YPGYGFGAYG RQKWEEDPAY
QPLRQAVEQM LVAYDYTEAL VSFALAIKPA ADIALLEYYG RLADLNGDKY LYQIHLSFLK
DSQRHQDQLV ALFKYAFERA PSTKDIVRSQ LGRWRNAAEA SVRGLRPVFE SMPVKIPVDE
VVDSVKAKFR ELDSAIGL
|
|---|
| |