| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_0516 |
|---|
| Symbol | |
|---|
| ID | 5054860 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | - |
|---|
| Start bp | 467862 |
|---|
| End bp | 468194 |
|---|
| Gene Length | 333 bp |
|---|
| Protein Length | 110 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640468078 |
|---|
| Product | Rieske (2Fe-2S) domain-containing protein |
|---|
| Protein accession | YP_001152763 |
|---|
| Protein GI | 145590761 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.543189 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGGAAA TTGAAGTCGC GGCCTTTGAG GAGCTTAAAG AGGGTAGGCC TTTGACCAAA
TACGTAGACC TTGGCGATAG GCTACTCCCC GTGTTGTTGA TTAAATTAGG CGGCGAGGTG
TACGCCCTAG AGCCTTTGTG TCCCCACGCC AAGTGGCCGC TGGAGGTCTT CGGCGTGTTT
ACCGAAAGAG GCGGGGCAAA AGTCGTGTGT AAAATACACT GGGGCGTCTG GGATCTCTCA
GACGGCGGCG GCCGCTTTAA GGACAGGGAG GCGCCCCGGC TGAGGACTTA TAAAGCCGTG
GTGCGTGACG GCAAGGTCTA CGTCGAGTTA TGA
|
|---|
| Protein sequence | MAEIEVAAFE ELKEGRPLTK YVDLGDRLLP VLLIKLGGEV YALEPLCPHA KWPLEVFGVF
TERGGAKVVC KIHWGVWDLS DGGGRFKDRE APRLRTYKAV VRDGKVYVEL
|
|---|
| |