Gene Pars_0505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0505 
Symbol 
ID5055394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp456447 
End bp456989 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content49% 
IMG OID640468067 
Producthemerythrin HHE cation binding domain-containing protein 
Protein accessionYP_001152752 
Protein GI145590750 
COG category[S] Function unknown 
COG ID[COG3945] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.581987 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.213341 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAAAG TCAGAGTGAA GTACGTGACG TCGGCTCTTA GAGAACACCA CGATAAAATT 
CTAGAGGCAG TGGCCCTGTT GGATAAAGTA CTGTCCAGCC CATCTCCAGA CCCGGAGGCC
GTTCACTTCT TAATTCAGTT TATACAGCGT TTTGTAGATC AATGCCACCA CTCAATAGAG
GAGTACGTAC TGTTCCAGGG GGTTAATAGA CAGGGCTTTC CCTACCTCGG CTCGCCTATA
TACGTCATGA CGTCAGAACA CGGCATCGGG CGCTATCTGG CTAGAGTAAT GGAGGAGCTC
TACACTGCGT GGAAAAACGG CGACCAAAAC GCCTTGAAGG ATCTCGTTGA CTACGCGAGG
CTCTACATCG ATCACATATC TGATCACATC TTGAAGGAGA ACAACGTCTT GTTCCCAATG
CTGGAATCAA GCTACTCAGA GGTATCCTCG TCGCGGACTG TGGAGGACAT TGAGAAGGAG
AATCAACATG ACTACTGGAT GGCCAAATTA GAGAAGTTGA AGAAATCGTG GAGCGGACAG
TAG
 
Protein sequence
MPKVRVKYVT SALREHHDKI LEAVALLDKV LSSPSPDPEA VHFLIQFIQR FVDQCHHSIE 
EYVLFQGVNR QGFPYLGSPI YVMTSEHGIG RYLARVMEEL YTAWKNGDQN ALKDLVDYAR
LYIDHISDHI LKENNVLFPM LESSYSEVSS SRTVEDIEKE NQHDYWMAKL EKLKKSWSGQ