Gene Pars_0465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0465 
Symbol 
ID5054926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp410003 
End bp410815 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content61% 
IMG OID640468030 
Producthypothetical protein 
Protein accessionYP_001152715 
Protein GI145590713 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0969494 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTAA ACGCCTATGC TAAGATAACA GCCGCCGCCG CGCTTTGGTC TACGCTAGGC 
GTTGCGGCGA GTCTGGGAGG GGATCTTATA TGGCTGGCCT TTTATCGCTC TATTTTTGCG
GCCGTGTTGT CGCTGGCCAT AGCTAAGGGG ATATCGAGGA GAGGTGTTGT ACCTGGGCTG
TTTCTAGGGG CTCTCTTCAC CACGTATCCC ATCGCCGCTG TCTATGCCGG AGTTGGCCCA
GCCGCCTATC TGTTATACAC GGCGCCTCTC TGGACCACCC TGGTGCTACT TCCCGCGGGG
GAGCGGCCTA ACAAGTGGGG CGCTGTTGCC GTAGCGCTGG TACTGGCGGC GGTGGCGGTT
ATGTTGCAAG CGTCGGCCAG CGGGGAGCTA TCGGCAATAG GGCTGGTGGC AGGCCTTGCC
TCGGGGCTGT TCTACGGGCT GTACATCGCA ACGGCGCGGC TAATATCTAA ACGCGGCGGG
GCGAGGGAGG CGTCCTACGG CGCAATGCCG TACACGGTGT CGGTCACAGC CCCCGTACTC
CTCTACCACG CGCAGATGAA TCACGCCTTT CCCACAGCGA GCGAGATCCT CGCAGGCGCC
TACATGGGGG TGTTAGGCAC AGTACTGCCA TACAGCCTTT TCGCATCGGC AGTAGAGAAA
GTTGAGGGGT CCAGAGCCTC TGTGGTGGCC TCGTCTGAGC CAGTGCTCGC CGCTCTGTGG
GGGTACCTCC TCTTTGGCCA GGCGCCGGGA CCCCTAACGC TGGTCGCTTA TATACTGCTC
ACAGCCGCCG CTGTAATTGC GTCGAAAAAA TGA
 
Protein sequence
MTLNAYAKIT AAAALWSTLG VAASLGGDLI WLAFYRSIFA AVLSLAIAKG ISRRGVVPGL 
FLGALFTTYP IAAVYAGVGP AAYLLYTAPL WTTLVLLPAG ERPNKWGAVA VALVLAAVAV
MLQASASGEL SAIGLVAGLA SGLFYGLYIA TARLISKRGG AREASYGAMP YTVSVTAPVL
LYHAQMNHAF PTASEILAGA YMGVLGTVLP YSLFASAVEK VEGSRASVVA SSEPVLAALW
GYLLFGQAPG PLTLVAYILL TAAAVIASKK