| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_0438 |
|---|
| Symbol | |
|---|
| ID | 5054569 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | - |
|---|
| Start bp | 381546 |
|---|
| End bp | 381962 |
|---|
| Gene Length | 417 bp |
|---|
| Protein Length | 138 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640468004 |
|---|
| Product | iron dependent repressor |
|---|
| Protein accession | YP_001152689 |
|---|
| Protein GI | 145590687 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1321] Mn-dependent transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCTCG CCTCTATGAG GAGGGGCCAC GAGGTGAAGG ACGTAAGGCT GGAGCACTAC
CTCGAGGCCA TATACGCACT GTCTAAGGAG GGCCGGGCCA CCTTGAGCGC GTTGGCGGAG
GCCCTGGGGG TGAAGCCCAG CTCGGCGCAG AAGATGGTGC GGAGGCTGGA GGAGCAGGGC
TACGTGGTAT ACAAGGGGCG GGGTGGGATA GAGATAACCC AGCGGGGCCG CGAGCTGGTG
GACAGGCTCA ATAAGTCGCA CAGAACTCTG GCCGAGCTCT TTAAGCTCAT AGGCGTGGAG
GAGGAGCTGG CGGAGGCTGA GGCCGAGAAG CTGGAACACG TAATAGATCC GAAGGTGGTA
GAGCGGCTCG CCAAGCTGGT GGAGGCGCTG AAAGGAATGA GGCACGTCTT AGCGTGA
|
|---|
| Protein sequence | MDLASMRRGH EVKDVRLEHY LEAIYALSKE GRATLSALAE ALGVKPSSAQ KMVRRLEEQG
YVVYKGRGGI EITQRGRELV DRLNKSHRTL AELFKLIGVE EELAEAEAEK LEHVIDPKVV
ERLAKLVEAL KGMRHVLA
|
|---|
| |