Gene Pars_0338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0338 
Symbol 
ID5056385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp292422 
End bp292871 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content66% 
IMG OID640467914 
Productmembrane protein-like protein 
Protein accessionYP_001152601 
Protein GI145590599 
COG category[S] Function unknown 
COG ID[COG4743] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGGGG TGAAGCGTGG GGAGTACGCC CTGGAGACGG GCGCCGACTC GTTCCTCGCC 
TACGTCCTGG GCCCTGGTGG GGCTTGGCTG TGGTCGGTTG CGGCGCTGAC CGCCGCGGCC
GCAGTCTTGG CGCTGTACGC CGAGGCTCCG CCCCTGCTCT ACCTTAGGTA TGTGGTGGGG
GCTTTTTTCG TCTTGTTCCT CCCGGGGTAC GTGATAGTGG AGGCGCTCTA CCCCAAGCCA
GGCGAGCTGA AGCCGCTTGA GAGGCTTGCC CTTTCTATTG GCCTCAGCTT GGCTGTGGTC
CCCCTGGTTG GCCTCCTCCT CAACTACACG CCATTTGGGA TAAGGCTGGG GCCCGTGGTG
GCGAGCTTGG CGGCCCTCAC GGCGGCCGCG GCGGCCTTCG CCGCCTATAG GAAGTACAGG
TCGGAGATGT TGGCCGCGGC GTGTGCCTAG
 
Protein sequence
MLGVKRGEYA LETGADSFLA YVLGPGGAWL WSVAALTAAA AVLALYAEAP PLLYLRYVVG 
AFFVLFLPGY VIVEALYPKP GELKPLERLA LSIGLSLAVV PLVGLLLNYT PFGIRLGPVV
ASLAALTAAA AAFAAYRKYR SEMLAAACA