Gene Pars_0308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0308 
Symbol 
ID5054574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp268244 
End bp269326 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content52% 
IMG OID640467885 
ProductABC transporter related 
Protein accessionYP_001152572 
Protein GI145590570 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTAGCGG TTACAGTGGA AAAACTAGAG AAGGTTTTTC CTCCAAATGT GTATGCTTTG 
AAAGACGTGA ATGTTAGCAT CAAAGACGGC GAGTTTCTCG TCGTGCTGGG CCCCTCAGGC
TCCGGCAAGA CGACATTTAT CAGATGCATA GCTGGGCTTG AAACGCCGAC GAGGGGACGT
ATCCTATTTG GCGACGTTCC GGTAGTAGAC GTGGAGAAGG GGATAAACGT ACCGCCCGCC
AGGCGGAATG TGGGCATGGT GTTCCAGAAC TGGGCCCTCT ACCCGCATAT GAAGGTGTTT
GACAACATAG CGTTTCCCCT AAAGATAAAA AAGGTTCCTA AAGAGGAGAT CAAGAAGAGA
GTGAAGGAGG TGGCCGAGGC GCTGGGGATC TCCGAGTTGC TTGACCGCTA TCCTAGACAA
CTCTCTGGGG GTCAGCAACA GAGAGTTGCC ATCGCCCGGG CGTTGGTGAA GGAGCCTCAG
GTTCTCCTAA TGGATGAGCC GTTTTCTAAC CTCGACGCGA GGCTCAGGAT TTCTGCGCGG
GAGTTTGTAA AGAGCTTGCA GAGGAAGCTG AAGGTGACCA CTATCCTTGT GACTCACGAC
CAGCACGACG CATATGCCCT TGCGGACAGG CTCATGATTA TAAACAACGG CGTGGTCCAA
CAGATCGGCA CAGCAGACGA GATCTTGAAC AACCCCGCCA ACGTCTTCGT GGCGCAGTTC
TTCGGCGACC CGCCTATCAA TATCTTGGAG GGAGAAGGCC GGGGCGATTA TGTAGACCTA
GGCGATTTTA AAATACCCGT TAAGGCCCCG CCGGGGAGGC TCCAGGTAGG GATAAGGCCA
ACCGACGTTT ATATTGCAGA ACGCCCCATG GCCCCCGGCG ACGTGGAGCT ACAGCCAGCG
CGTGTGGTGC TGGTCGAATA CCTGGGCTTC ACTCCGGTGG CAGTTATTAA GTGGGAGAAA
AGCGAGATGA GGGCCATTGC CTATGACAAG GTTAAAGAAG GTAGTATTGT CAAAGTATTT
CTAAGGAAAG ATAATGTAAA ATTATTTAAA GACAGTATAA GGATTAGCAA TATAGAAATT
TAG
 
Protein sequence
MVAVTVEKLE KVFPPNVYAL KDVNVSIKDG EFLVVLGPSG SGKTTFIRCI AGLETPTRGR 
ILFGDVPVVD VEKGINVPPA RRNVGMVFQN WALYPHMKVF DNIAFPLKIK KVPKEEIKKR
VKEVAEALGI SELLDRYPRQ LSGGQQQRVA IARALVKEPQ VLLMDEPFSN LDARLRISAR
EFVKSLQRKL KVTTILVTHD QHDAYALADR LMIINNGVVQ QIGTADEILN NPANVFVAQF
FGDPPINILE GEGRGDYVDL GDFKIPVKAP PGRLQVGIRP TDVYIAERPM APGDVELQPA
RVVLVEYLGF TPVAVIKWEK SEMRAIAYDK VKEGSIVKVF LRKDNVKLFK DSIRISNIEI