Gene Pars_0274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0274 
Symbol 
ID5054338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp246032 
End bp246793 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content60% 
IMG OID640467852 
Producttransposase, IS605 OrfB 
Protein accessionYP_001152539 
Protein GI145590537 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.609151 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTTAA ATAGGTTGAG TGGGAGCTAC GTGTTCACCT ACTACCTCCG ATGCGATGCT 
GAAAAGGCGA GGGAGGCGCT GGATGGGGAC TACAAAGTGG TGGACCTCGG CGGCGCGGTG
AGGGTGGTAG AGAGCTTTAT TACTCTGTAC GCCGGCGACG TGCCGCTCTG CATGTACAAG
AGCTGGCGCA TGACCTACAC CGACTACCAA ATCTACGGCC TCGCCAGCGC AGAGGTTTTT
GTCAGGAAAG ACGGCGTATT GGTGAGGCTG GTGAGGGCCG ACGAGAAGGT AGGCCTCCCA
GAGCTAGTCG AGGGGTCGCC CCTAGTGGTC CACGCCATGG ACGTCAACGA AAACGGCGTG
ATGTACCGCG TCTTCAGGAT AGGCGGCTAC GTGGAGCTGG CGGCGAGGGG AGTCGCTGGC
GGGATAAAAG AGGCCTTCCA CCCCAAGAAG GGGGTAAACC TGCTCATCGT CGACTTGCCC
ATCTCGCCGA AGTTCCAGCA CCTTCTAGGA GAGGTGTTCG ACTTGGCGAG GGAGCACTTC
GTCGAGCTCC ACACCACGAT GCTCTCCGAC GTGTGCCCCC TGTGCGGGGG CCGGATGGAG
AAAAGGGGGA GGCTGGTGCG GTGCCCCCAG TGCAAGGTGC AACTCAGCCG CGACGTAAAC
GCGGTTTGGG CCCTGGCGAG GAACATCGTG AGGAGGCTCG GCAGGGAGCA ACAGCTGGCG
GAGCTGAGGG AGATATTCCG CCTGTACTAC CCCAACGTCT GA
 
Protein sequence
MFLNRLSGSY VFTYYLRCDA EKAREALDGD YKVVDLGGAV RVVESFITLY AGDVPLCMYK 
SWRMTYTDYQ IYGLASAEVF VRKDGVLVRL VRADEKVGLP ELVEGSPLVV HAMDVNENGV
MYRVFRIGGY VELAARGVAG GIKEAFHPKK GVNLLIVDLP ISPKFQHLLG EVFDLAREHF
VELHTTMLSD VCPLCGGRME KRGRLVRCPQ CKVQLSRDVN AVWALARNIV RRLGREQQLA
ELREIFRLYY PNV