| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_0233 |
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| Symbol | |
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| ID | 5055346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | - |
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| Start bp | 209181 |
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| End bp | 209954 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640467812 |
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| Product | tRNA pseudouridine synthase ACD |
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| Protein accession | YP_001152500 |
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| Protein GI | 145590498 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.250363 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.206839 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTACC TCTACCGCAT AGCTTACGAC GGCACGTTGT TCTACGGCTT CACCGGCCAC
CCCAACTCCC TGGAGCCCAA GCTGAGAGCT GCCCTCGGCG AGATTCTGGG AAGAGGGAGC
CGCACAGACC CAGGCGTCTC GGCGGTGGCC AACGTCGTCA TGACGAGCCA GAGGCTACAC
CTGGGGTACG TCAACTCGAA GCTCCCCCGC GGAGTCTGGG CCTGGGGCGT GGCCGAGGTA
CCCGAGGGGT TCAACCCCCG GAGGGCAAAG GCACGTAGAT ACCTCTACGT AGCCCCCCAC
TGGGGCGAAG ACGTGGAGGC GATGAGGGAG GCGGCCGCCG TGCTGGTTGG GACGCATGAC
TACAGCTCTT TTATAAAGCG GAGGGGGGAC AAGGCGACGC CTACGGTGAC CACTGTGTAC
AAAATCGAGG TGGAGCAGAG AGGCGGGCTT ATATACATGA TGTTCGTGGG CCGCGGCTTT
AGGAACAAGA TGATACGGAA AATGGCCTGG GCGATACTCG CTACAGGCCG AGGCGTCTTG
AAGGCCAGCG ACTTGAGGGA GCTGGTGGAG CGTCCCAGGC CAGGCGCGGT GCCCTCCGCA
CCGGCCGAGG GGCTTGTATT ACTGGACATA GACTACGGCA TAGAGTTCGA GGTTTACCAC
ACGGCGCTTA GAGAGGCCTA CACCTACTTC CTCCGTAAGT ACAGAGCAGT TGAGGCGCAC
GCCGCGGCGC TTAAGGCGGC GGGGGAGGCA CTGGCGCGAC TTGACGTGGT GTAA
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| Protein sequence | MPYLYRIAYD GTLFYGFTGH PNSLEPKLRA ALGEILGRGS RTDPGVSAVA NVVMTSQRLH
LGYVNSKLPR GVWAWGVAEV PEGFNPRRAK ARRYLYVAPH WGEDVEAMRE AAAVLVGTHD
YSSFIKRRGD KATPTVTTVY KIEVEQRGGL IYMMFVGRGF RNKMIRKMAW AILATGRGVL
KASDLRELVE RPRPGAVPSA PAEGLVLLDI DYGIEFEVYH TALREAYTYF LRKYRAVEAH
AAALKAAGEA LARLDVV
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