| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_0227 |
|---|
| Symbol | |
|---|
| ID | 5055811 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | - |
|---|
| Start bp | 204524 |
|---|
| End bp | 205138 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640467806 |
|---|
| Product | glutamine amidotransferase subunit PdxT |
|---|
| Protein accession | YP_001152494 |
|---|
| Protein GI | 145590492 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0311] Predicted glutamine amidotransferase involved in pyridoxine biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.550903 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.363772 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTGG GCGTGTTGGC GTTGCAGGGC GATGTGGAGG AGCACCTAGA GGCCTTTAGG
AGGGCCGCCG CTGAGCTGAA CATCTCGGCG GAGGCGGTGA GGGTAAAGAG GGCAGATCAG
CTGGACGGCT TGTCGGCTTT GGCTATACCC GGAGGAGAGT CCACCACTAT CGGCAAGCTA
GCCCAGAGGC TGGGGATTTT AGACCGGCTA AGGACCGTAG TTGAGTCAGG AGTTCCAACC
CTGGCCACCT GCGCGGGGGC CGTGTTGCTG GCCAAGGAGG TGAGAGACTC CGTTGTGGGC
CCCACGGGCC AGCCGCTCCT CGCCGTGCTC AACGCCGCCG TTGTTAGAAA CGCCTACGGG
AGGCAGAGGG ACTCCTTCGA AGCCAATGTC GACGTGGAGG GCATAGGTAC GGTAAGGGCA
GTGTTCATAA GAGCCCCGAT CTTCGCCAAG ACGTGGCCCC CCGCGAGGGC CATCGCGCAT
GTCGACCATC CCCGCGCCGG CAGGGCAATA GTCGCTGTTA GACAAGACCA CGTGCTGGCA
ACAGCCTTCC ACCCGGAGCT TACCACCACG GCCTTTCACA AGGCCGTACT GGAAATGGCG
GCAGGTAGGC TCTAG
|
|---|
| Protein sequence | MKVGVLALQG DVEEHLEAFR RAAAELNISA EAVRVKRADQ LDGLSALAIP GGESTTIGKL
AQRLGILDRL RTVVESGVPT LATCAGAVLL AKEVRDSVVG PTGQPLLAVL NAAVVRNAYG
RQRDSFEANV DVEGIGTVRA VFIRAPIFAK TWPPARAIAH VDHPRAGRAI VAVRQDHVLA
TAFHPELTTT AFHKAVLEMA AGRL
|
|---|
| |