Gene Pars_0132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0132 
Symbol 
ID5055580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp118825 
End bp119934 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content65% 
IMG OID640467711 
ProductSufBD protein 
Protein accessionYP_001152399 
Protein GI145590397 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTGA AATTTGCAAA GGCTCTGGGG GCTGAGCTAG CGTCGAAGCT CCCGTGGCAG 
GAGATTGCCG ATTCCCCCAC GGTAAGGTAC TACACGGAGT GGTCGAAGTT CGAGGGGTAT
AAGCCCCTGG AGGTCCCGGC GCCGTTGCCG GGGGAGGCCG GGCCTTGCAA AATCGTGTTG
GTAGACGGAG CGTTGGCGGC TGTGGGAAGG TGTAGCGGCG TTGAGGTGGG GGCCGCCGCG
GATGTGTTCC ACAACGTCCA GATAAACAGC AAGATACTGG CCCTCCACGC CTCGGCGCTT
CGGGCGGCGG TCCGCATTAC GATTACGGGG CAAGTGGAGC CGCTGGTGGT CGTCATGTCG
GCCTCGGCGA AGGGGGCCCA CACGGCTAGC CACGTGGTTA TTGAGGCGGA GCCAAGCGCC
GCTGGGTCGG TGGTGGTCTA CGCGGAGACG GCTGAGGGCG CCATGCACAC GGCGGTGGTG
GAGGGTCGGC TGGGCGGCTA TTTGGAGTAC GTGCTTGTTT CTAGGGGCGG CGGACCTCAA
TACGTGCACT CGGCTCTGGC CGTGGAGAAG TCAGTTGCCG CCAGGCCCTT GGCCTTCGGC
GGTGTAATGA ACTCAGTAAG GGAGGAGTAC GTCATAGGGG AGGGGGCCTC CGCCGAGGTT
GTAGGCCTAG AGCTGGGGGT GGGGGATAGC AGGATCGACC ACGTGGTGTC TGTAATAAAC
GACGCGCCGA GGGGGAGGGG CTTCGCGAGG CTGTATGCGG TGGCCGCGGA CAGATCCTTC
GTGACGCAGA GGGCGGTGGG CCGCATCACC AAGCGGGGCG CCGGTAGCAA CAGCGCGGTG
GAAGGCGTCG TCTACATCGC CGGCGACGGG GCTGTGGCCA ACACCCAGCC GGTGATCCTC
GTCGAGACGG GGGACGTTGA GGGCGCGAGG CACTCCGCCG CCGACGCTGC CTTAGACGAG
GATAGGGAGT TCTTCCTGCG CGCCCGGGGC GTGAGGAAGG ATGACCTGCC CAAGCTCCTA
ATGCTGAGCC TGGTTGACCA GTACCTCTCC TCCCTGTCCG AAGCGGCGAG GGGCGTCGTG
GAGCCGCTTC TAAAGCCCCT CTTTAGCTAA
 
Protein sequence
MDLKFAKALG AELASKLPWQ EIADSPTVRY YTEWSKFEGY KPLEVPAPLP GEAGPCKIVL 
VDGALAAVGR CSGVEVGAAA DVFHNVQINS KILALHASAL RAAVRITITG QVEPLVVVMS
ASAKGAHTAS HVVIEAEPSA AGSVVVYAET AEGAMHTAVV EGRLGGYLEY VLVSRGGGPQ
YVHSALAVEK SVAARPLAFG GVMNSVREEY VIGEGASAEV VGLELGVGDS RIDHVVSVIN
DAPRGRGFAR LYAVAADRSF VTQRAVGRIT KRGAGSNSAV EGVVYIAGDG AVANTQPVIL
VETGDVEGAR HSAADAALDE DREFFLRARG VRKDDLPKLL MLSLVDQYLS SLSEAARGVV
EPLLKPLFS