Gene Pars_0114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0114 
Symbol 
ID5054978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp101779 
End bp102270 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content56% 
IMG OID640467693 
ProductPaREP1 domain-containing protein 
Protein accessionYP_001152381 
Protein GI145590379 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCTCCA CGCAGACCCT AGAGATAATC CGCAAAGCCG CCGGCGGCGG GGACGTCGAC 
GAGAACGTGC TTAAGCTAAT AGCGGAGAAG GCAGACCCGC CGATACGCGT AGAGGCATAC
CTGAGGCTAC ACGAGAAGTA CTTGAGGGAG GCAGAGGAGC TGTACTCCAA GGGAGACCTC
TTGCAAGCCG GGGAGAAGTA CTGGGGCGCC GTTGCGGCGC TGATAAACGC CATAGCCGAG
AAGAGGGGCT GGGAGCACTA CAGCCACAGA GACTACAACA TCGTAGTCAG AAGGCTGTAT
GAGGAGATGG GAGACCCCGA GCTAATAATA GGCTTCGGAA TGGCGGAAAG GCTACACGCC
AACTTCTACC ACAACTACAT GGGCCCCAAA GACTTCCAAG TACATAGAGA GGCCGTCCTA
GCGCTGGTGG AAAAGCTGAA GAAGATGCTT GCTCAGGCAG AGTTAGACCT AAGGCTACCC
AGGCAGATCT AA
 
Protein sequence
MVSTQTLEII RKAAGGGDVD ENVLKLIAEK ADPPIRVEAY LRLHEKYLRE AEELYSKGDL 
LQAGEKYWGA VAALINAIAE KRGWEHYSHR DYNIVVRRLY EEMGDPELII GFGMAERLHA
NFYHNYMGPK DFQVHREAVL ALVEKLKKML AQAELDLRLP RQI