Gene Pars_0111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0111 
Symbol 
ID5054918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp96558 
End bp97397 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content62% 
IMG OID640467690 
Productprephenate dehydratase 
Protein accessionYP_001152378 
Protein GI145590376 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0077] Prephenate dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCCCCC TTGTCGACGG GGTCTTGGCG CCTGTAATAG CAGCAGAAGT GTCGCGGCTT 
CACAAACCCC CAGTCGCCTA TCTGGGACCT GAGAAGTCCT TCACCTGGGA GGCTACCGTC
GCCTTGTTTC CACACGGCGA CTTGAGGCCG AGGAGGTCAA TAACCGAGGT TTTTAAAGAA
GTGGAGAGCG GAGCCGCCGA CTACGGGGTG GTGCCTTTTA TAAACAGCCT CGAGGGCCCT
GTGGGGGAGA CTATAGACGC CCTTGCCACG CACGGCCTCA GCATAGTGGC CATGGGCGAA
ATGAGGATCA CGCTCTGCGT TGCTAAGAAG GGCGCGCCGA GGGTGTTGTT CACGCACCCG
CACGCGGCGG CGCAGGCGAG GAGGCTAATC GCATCGCTGG GCGCCGAGGT CGTCTACGCC
AGCTCGACAT CGGAGGCCGT GGCGGAGTTT GAGAAGTGCC CCGGCGACTG CGCCGTGCTC
GCCTCGCCCA AGGCGCTTAG CCATTTGGAA AAGACCTGCG GCGTGGAGGA CGGTGAGAGC
TACACGAGAT TCGCCGTAGT CTCCAAGGAA GGCGGGGCCG CGGGGCGGTG GGCCCTCCTC
ATATTTGCAG TGCCCAACGT CGCTGGCGCA TTGCACAAAG CGCTGACCCC CCTAGCGGAG
CGCGGCATAA ACATGTCGCT CATATACTCC AGGCCCACCC GGCTGTCCCC CTGGGACTAC
TTCTTCGTCG CAGAAGTCGA GACCTCCGGC GAGCTGGAAG CCGCGCTAGA GGAGATGAGG
CGGCGCACCA CCATGCTGAA GACAGTGGGC AGATACAACT TAGTCAAGAT ACCCCCGTAA
 
Protein sequence
MPPLVDGVLA PVIAAEVSRL HKPPVAYLGP EKSFTWEATV ALFPHGDLRP RRSITEVFKE 
VESGAADYGV VPFINSLEGP VGETIDALAT HGLSIVAMGE MRITLCVAKK GAPRVLFTHP
HAAAQARRLI ASLGAEVVYA SSTSEAVAEF EKCPGDCAVL ASPKALSHLE KTCGVEDGES
YTRFAVVSKE GGAAGRWALL IFAVPNVAGA LHKALTPLAE RGINMSLIYS RPTRLSPWDY
FFVAEVETSG ELEAALEEMR RRTTMLKTVG RYNLVKIPP