Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_0076 |
Symbol | |
ID | 5054375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | + |
Start bp | 71029 |
End bp | 72783 |
Gene Length | 1755 bp |
Protein Length | 584 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640467654 |
Product | ATP-dependent DNA ligase |
Protein accession | YP_001152343 |
Protein GI | 145590341 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1793] ATP-dependent DNA ligase |
TIGRFAM ID | [TIGR00574] DNA ligase I, ATP-dependent (dnl1) |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.101904 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAGTTTG GCGAGTTGGT AAAGGCGCTG GCCGCCGTCG AGTCCACGAC GCAGAGGAGC GTAATGGTGA AGCTTTTGGC CTCGCTCTTC AAGAAGGCGT TGCCTGAGGA GATAGACAAG GTTATCTACT TGATTTTGGG GGATCTGAGG CCTCCTTGGG AGGGCCTTGA GCTAGGGGTG GGGGAGAAGC TGTGTCTCAG AGCTTTGGCA AAGGCCACTG GGACATCCCA GGCGGAGCTG GAGTCTATGT ATAAGAAGAC GGGCGACATA GGCGAGGCGG CGCGGCGGGC TCTTGCATCG TCAAAGCGAC CGGGGCTTCT GGCTTTCGGC TCGCAGAAGC CGCTGGAGGT GTCCGAGGTC TACGATGCCC TTATCAAGGT GGCGAGGGCG ACCGGCGAGG GGGCGCAAGA CATGAAAATC GCCCTCCTCT CCTCGCTTTT TGCCAGGTCC TCTCCTGAGG AGGGGAAGTA CATCGCCCGT TTTGTTGTTG GGAAGCTTAG GCTCGGCGTT GCCGACATGA CGATAATCGA GGCGCTGGCG GATGCCTACG GCGTGAGGAA GGAGGATTTA GAGAGGGCCT ACCACGTCTA CCCCGACCTC GGCCACCTCG CCAAGCTCGT CGCCTCCGGG AAGCCCCTGG ACGAGGTGAA GGTGACGCCT GGCGTCCCCG TCCTCCCCAT GTTGGCGCAG AGGCTCTCCT CGTCGTCTGA GATCTTGGCT AAACTGGGAG GCGCAGCGAT ATGTGAGTAT AAATACGACG GGGAGAGGGC GCAGATACAC ATCTCGCAGA GCGGCGTGAG GATTTTCAGC CGGAGGCTTG AGGACATCAC CCACGCCTAC CCGGACGTGG TCAAGGCCGT GAGGGAGGCC GTGTCGGCGA GAGAGGCCAT ACTGGAGGGG GAGATCGTTG CGGTGGATCC AGACACCGGC GAAATGTTGC CGTTTCAAGA GCTTATGCAC AGGAAGAGGA AGCACGAGGT GGCGGCGGCG ATGGAGATGT ACCCCACAGT CCTCTACCTC TTCGACATCG TGTACGTCGA CGGGGAGGAT TTGACCAACG AGCCTTTGAT ATACCGCCGC GTGAAGCTTT CTGAAATAGT CCATGAAAGC GACAAGGTGC AAATAGCGAA GTGGCAGATG TTCGACGACC CGGATACTGT TGATGTGTTT TTCCACGAGG CAGTCTCAGT GGGCACAGAG GGCCTGATCT GTAAGTCGCC GACGTCGGAG TACGAAATGG GAGCGAGGGG GTGGAACTGG ATTAAGTACA AGCGCGACTA CAAGAGCGAG ATGATAGATA CGGTGGATCT AGTGGTGGTG GGGGCCTTCT ACGGCCGTGG AAAAAGAGCC GGCCTCTACG GCGCCTTTCT CCTAGCCGCC TACGACCCCT CCAGTGATAT GTTCTACACC GTGTGCAAAG TGGGCAGCGG CTTTACAGAC GCAGATTTGA AGAAAATGTA TGAGATCCTC CAGCCTCTAA AAATACCTCA CAGACACCCC CGGGTATCAT CAAAGATGGA GGCCGACGTG TGGTTTGTGC CGCAGGTGGT AATAGAGGTA ATTGGCGCAG AGATCACTCT CTCTCCGCTA CACACTTGTT GTCTTGGCGC CGTTAGGCCT GGGGTTGGGC TAGCGGTGAG GTTCCCCCGC TTCACTGGCC GCTATAGGAC AGACAAGGGG CCGGAGCAAG CCACCACAGT CGCCGAGATG CTAGAGCTCT ACAAAAGGCA GAAAAAGGTG GCTCAGCCTG AGTAG
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Protein sequence | MQFGELVKAL AAVESTTQRS VMVKLLASLF KKALPEEIDK VIYLILGDLR PPWEGLELGV GEKLCLRALA KATGTSQAEL ESMYKKTGDI GEAARRALAS SKRPGLLAFG SQKPLEVSEV YDALIKVARA TGEGAQDMKI ALLSSLFARS SPEEGKYIAR FVVGKLRLGV ADMTIIEALA DAYGVRKEDL ERAYHVYPDL GHLAKLVASG KPLDEVKVTP GVPVLPMLAQ RLSSSSEILA KLGGAAICEY KYDGERAQIH ISQSGVRIFS RRLEDITHAY PDVVKAVREA VSAREAILEG EIVAVDPDTG EMLPFQELMH RKRKHEVAAA MEMYPTVLYL FDIVYVDGED LTNEPLIYRR VKLSEIVHES DKVQIAKWQM FDDPDTVDVF FHEAVSVGTE GLICKSPTSE YEMGARGWNW IKYKRDYKSE MIDTVDLVVV GAFYGRGKRA GLYGAFLLAA YDPSSDMFYT VCKVGSGFTD ADLKKMYEIL QPLKIPHRHP RVSSKMEADV WFVPQVVIEV IGAEITLSPL HTCCLGAVRP GVGLAVRFPR FTGRYRTDKG PEQATTVAEM LELYKRQKKV AQPE
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