Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_52147 |
Symbol | |
ID | 5006846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009375 |
Strand | - |
Start bp | 21198 |
End bp | 22465 |
Gene Length | 1268 bp |
Protein Length | 406 aa |
Translation table | |
GC content | 47% |
IMG OID | 640422267 |
Product | predicted protein |
Protein accession | XP_001422878 |
Protein GI | 145357341 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5021] Ubiquitin-protein ligase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 57 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAAGC AACGCCCGCT GTTGCTTTCC GGACCCATGA AAATCCTGTT GAGCAATCCA CGCTTGCTGG ACTTCTCCGT CAAACGTGCG GAGATTCGGA CACGAATCAA GAAACTTCGC GAACGCCTAG GACATAATCG TCCAGAGGCG CGAACGTTAC ACATTAGGCG TGATCGAATA CTCGAAGACT CGTTTAGACA ACTCAACAGC CGGAGTATCG AAGAAATTCG AGGCAAAATC AGCATCGTTT TCGTGGGCGA AGAAGGCATG GACGGTGGCG GTTTGATAAA GGAGTGGTTC ACCATCTTGG CACGAGAAGT TTTCAATCCA AACATCGCTC TCTTCGAGTT GTCTCACGAC AAGGGATGCT ATCAGCCGAA TCAAAACAGT GTGGTCCATC CGGATTATCT CAGCTATTTT AGATTCGTCG GTAGACTCGT CGGTAAGGCT TTGTTCGACG ACATTCTCCT CAACGCATAC TTCACGCGTC CGATTTACAA GCACCTTCTC GGTCAGCAGC TCACATACGA AGACATGGAA GGTGTAGATC CAGATTATTA CAAGAGCTTG AAATGGATGC TGGAGAACTC TGTGGAGGGT GTCATGGAAT ACACATTCAG CGACACAACG TCTTATTTTG GTGAAACTCA AGTTCACGAT TTGACCGAAA ACGGACGAAA TATCGCAGTG ACAGATGCAA ACAAGTTTGA ATACGTCAAC CTGATAACCG CGCACCGAAT GACGAATGCG GTGAAGGACC AACTCGCTGC TCTCGTGAAG GGGTTTGAAG AAGTTGTCCC TAGAGAAACG ATTTCCATCC TGAATGCGTC TGAATTGGAA CTGCTCATAA GTGGTACCCC GGACATCGAC GTCGAGGATT TACGCGCCAA TACTGAATAC ACCGGCTTCA CCGTCGGGTC AAAACAAATT CAATGGTTTT GGGACGTCGT GAGGGAAATG AACAAGGAAG ACTTGGCGCG CTTATTGATG TTTTGTACCG GTACCTCTAA GGTTCCTTTG GATGGATTCG GTGCTTTGCA AGGCATGCAA GGCCCGCAAC GTTTTCAAAT CCATCGGCAG CACGCGGATG ATTCAAAGTT GCCATCCGCA CACACGTGCT TCAATCAACT CGATTTGCAC GAATACAGCT CAAAGCAAAT CTTACGCGAC AGGCTGCTGT ACGCGATTGT TGAAGGTTGT GAAGGCTTTG GCTTCATTTA GATTAGCGAT TAACATAGAA TGTAACAACA CTAAACATGG AATTTCAA
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Protein sequence | MLKQRPLLLS GPMKILLSNP RLLDFSVKRA EIRTRIKKLR ERLGHNRPEA RTLHIRRDRI LEDSFRQLNS RSIEEIRGKI SIVFVGEEGM DGGGLIKEWF TILAREVFNP NIALFELSHD KGCYQPNQNS VVHPDYLSYF RFVGRLVGKA LFDDILLNAY FTRPIYKHLL GQQLTYEDME GVDPDYYKSL KWMLENSVEG VMEYTFSDTT SYFGETQVHD LTENGRNIAV TDANKFEYVN LITAHRMTNA VKDQLAALVK GFEEVVPRET ISILNASELE LLISGTPDID VEDLRANTEY TGFTVGSKQI QWFWDVVREM NKEDLARLLM FCTGTSKVPL DGFGALQGMQ GPQRFQIHRQ HADDSKLPSA HTCFNQLDLH EYSSKQILRD RLLYAIVEGC EGFGFI
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