Gene OSTLU_2179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_2179 
Symbol 
ID5006578 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009374 
Strand
Start bp204534 
End bp205805 
Gene Length1272 bp 
Protein Length378 aa 
Translation table 
GC content60% 
IMG OID640421999 
Productpredicted protein 
Protein accessionXP_001422684 
Protein GI145356946 
COG category[R] General function prediction only 
COG ID[COG1161] Predicted GTPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.805213 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000732595 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
CGGGGGGAGG CGGAAACGCT ACATAAAGAC GCGCTGAGCG TGCCGAGACG ACCGGCGTGG 
ACGCACGAGA TGCGAGCGGA GGAGGTGGAT GAAAACGAAC GGCGCGGGTT TTTGGAGTGG
CGGCGCGCGC TGGCGGCGGT CGAGGAAGAT TCGAGGTGCT CGCTGACGCC GTTCGAGAAG
AACTTGGAGA TTTGGCGACA GTTGTGGCGA GTGTGCGAGC GATCGGACGT CGTCGTGCAA
GTGGTGGACG CGCGAGATCC GTTGTTTTAT AGATGCGAGG ATTTGGAGGC GTACGTCAAG
GAGCTGAATC CGGGCAAGGC GACGATGCTG CTGTTGAACA AGGCGGATTT ACTCAGTAAA
GAACTTCGCC GGGCGTGGGC GGAGTATTTC AACGCCAAAG GGATTTCATT CTTGTTTTGG
TCCGCTAAGG CGGCGTACGA GGAGATTGAG GCTGAACAAA TCGCCGCCAA GGCGGCGCAG
ACGGCGAAGG AGCTCGAGGA GACAAACAGG CGATTGACCC TTCACGCGGG TGACGAGATC
GACGATGACG CCATGGAGCT CGCCGCGGAA CTTAGCGCGA AGGCGGAAGC TGCGCGTGAA
GCCGCGGATG CGCACGCTGA GACGCTCCAT CAGATGCAAT TCGATAGCGC CGACGCCGCC
GATCCAGCGC ACATTTGGTC CCGCGCCGAG CTCTTAGACA TTCTACAAAA GCGCGCGGAA
GCGGCGGTGG AGGCCATGGG TTCGACTCGA GTGAAACGTA AAGGCCCACA AGCGAACCGT
GTCGTGGTCG GTATGGTGGG TTACCCGAAC GTCGGCAAGT CGAGCACGGT GAACGCCATC
GTGGCGTCGA AGAAGACGGG CGTGAGCGCC ACGCCCGGTA AAACGAAGCA CTTTCAAACC
CTCGAGCTCG GCGACGATTT GCTTCTGGCC GACTGCCCAG GTCTCGTGTT TCCGACATTC
TCAACGTCAA AGGCGCATTT GGTGTGTAAC GGCGTCATAC CCGTCGATCG TCTCACGGAT
GTCACCAAGC CGATCGAAAT CATCGCCGAA CGTATTCCGA GGTCCACCAT CGAACACGTG
TACAACTTGA CGCTTCCATT ACCCGCGCTC CATGAAGACC AAGGGAGAAA CGCAACCGCT
CGCGAATTCC TGCGGGCGTA CTGCGCTGCG CGCGGGTACA CCGTTCAAGG CAATAGACCG
GACGAAGTTC GCGCCGGTCG CGCCGTGCTC AAGGATTACA TCAGCGGAAA GCTGCTGTAT
TGCGTCGCCC CA
 
Protein sequence
RGEAETLHKD ALSVPRRPAW THEMRAEEVD ENERRGFLEW RRALAAVEED SRCSLTPFEK 
NLEIWRQLWR VCERSDVVVQ VVDARDPLFY RCEDLEAYVK ELNPGKATML LLNKADLLSK
ELRRAWAEYF NAKGISFLFW SAKAAYEEIE AEQIAAKAAQ TAKELEETNR RLTLHAAHIW
SRAELLDILQ KRAEAAVEAM GSTRVKRKGP QANRVVVGMV GYPNVGKSST VNAIVASKKT
GVSATPGKTK HFQTLELGDD LLLADCPGLV FPTFSTSKAH LVCNGVIPVD RLTDVTKPIE
IIAERIPRST IEHVYNLTLP LPALHEDQGR NATAREFLRA YCAARGYTVQ GNRPDEVRAG
RAVLKDYISG KLLYCVAP