Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_28572 |
Symbol | |
ID | 5006491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009373 |
Strand | + |
Start bp | 96881 |
End bp | 98080 |
Gene Length | 1200 bp |
Protein Length | 286 aa |
Translation table | |
GC content | 64% |
IMG OID | 640421912 |
Product | predicted protein |
Protein accession | XP_001422390 |
Protein GI | 145356339 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0101] Pseudouridylate synthase |
TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 0.0301527 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.000000212396 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | CGGGCGTCCA TGCGGCGCGC GCGACGCGAT GGCGACGTGT GAATGGACGC GCGCGATCGT TCGAGCGCGC GCCGCGCGCG CGGAGAGGCG CGCAGACGAC GCGCGGGGAG GATTTCGAGC GCAAAAAGTG CGCTCGCGCG CTCGGGCTGG CGCGGGAAAG CGACGCGCGC GGGCCAACGC GACGGTTCGC GCGAGCGAAA ACGACGAAAG CGGCGCGGCG TCGAACGCGA GCGTCCGCGA GAGCGAGCCG TATGGGGAAA ACGCGGCGAA AAACGCGGCG TATAAGGCTT CGATGTCGGA CGCGCAGCTC GAGCTGCATC GCGCTTCGGG ACGCGACGTC ACGTACGCGC TGAAGATTTC GTACGATGGC GAGCGTTATA ATGGATTTCA GTACCAAGGC GAAGACGTGC CGACGATTCA GCGCGAACTC GAGCGCGCGC TCGCGAAGCT GACCGGGATC GATCGAGAAC GGCTTCGATT GGGCGCCGCC GGTCGCACCG ACGCCGGCGT GCACGCGCGA GGGCAAGTCG CGCACTTTTA TTGCGAAAAA TCGTTAGGAG AAGACTTGAC GCGGTGTCAA AAGGCGATGA ACGGGATGTT ACCGAAAGAC ATTCGCGTCG ACGCGTTCTG GGAACCCCAT CCGTTGTTTC ATTCGAGATT TCACGCGAGC GGCAAGACGT ACCACTACTA CGTGGACGCG CGCGCGACGT CGAGCCCGTT CACGAGAAAG TACGCGCATC AGGTCGGATG GCGCCCGTGC GACGTCGAAC TGTTGCGTCA AGCCGCGCAG TTGTTCGTCG GGACGATGGA TTACAAAGGG TTTTGCAACA CGTCGAGGGA TAAATCAAAC GAGGACAGGA ACACGACGCG AACGATTCGT CGCTTCGACG TCTTCGAGGA CGCCGCGGAC GACGGATTGA TTCGTCTCGA GGTCGAGGGC GACGGATTTT TGTATCGTCA AGTGCGCAAC ATGGTCGGCG CGCTCTTGGT CGTCGCGAGC GGCAAGCACG ACCTGGCGTA CCTGCGAACG CTCATCGAAA CCAAGGATCG CTCGCGCGCG CCCATGGGCG CGCCCGCGCG CGGCTTGTTT CTTCACGAAG TCTTCTACCC GACCGAGGTC TTAGCGAGAC CTCGTTCGGA CGACACCGCT TAAACGCGCG CGCGGCGTCG CTCGCGCGTT CGCTCGCCGC GCGCGCCCGC
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Protein sequence | MSDAQLELHR ASGRDVTYAL KISYDGERYN GFQYQGEDVP TIQRELERAL AKLTGIDRER LRLGAAGRTD AGVHARGQVA HFYCEKSLGE DLTRCQKAMN GMLPKDIRVD AFWEPHPLFH SRFHASGKTY HYYVDARATS SPFTRKYAHQ VGWRPCDVEL LRQAAQLFVG TMDYKGFCNT SRDKSNEDRN TTRTIRRFDV FEDAADDGLI RLEVEGDGFL YRQVRNMVGA LLVVASGKHD LAYLRTLIET KDRSRAPMGA PARGLFLHEV FYPTEVLARP RSDDTA
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