Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_28528 |
Symbol | RPS3a |
ID | 5006472 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009373 |
Strand | + |
Start bp | 20882 |
End bp | 22316 |
Gene Length | 1435 bp |
Protein Length | 260 aa |
Translation table | |
GC content | 59% |
IMG OID | 640421893 |
Product | Ribosomal protein S3a, component of cytosolic 80S ribosome and 40S small subunit |
Protein accession | XP_001422366 |
Protein GI | 145356290 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1890] Ribosomal protein S3AE |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 0.162919 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CCGCGCGCAT CGATCGCGCG TCATGGCGGT CGGAAAGAAC AAGCGCATGT CCAAGGGCAA GAAGGGCGGG AAGAAGAAAG CGTGCGTGCG CGACGCGACC CGAACGACCG CGAGGCGACG CGCGAGGCGA CGGGAAGAGG ATCGATCGAC GCGACGGGCG AAAGAAGGAC GCGGGACGAC GACGACGACG GGCGACGCCG GGGGGGGTGA CGGACGCGCG CGAAGCGCGA GGACGCGCGA GAAGGCGCGA GACGGTGGAT CAAAATCGCG ACCGTCGATG GGGGGCGCGA CGGGCGCGCG AGCGCGCGGG AGGAGGACGC GGGGGAGGGG GACGGCGACG CGATCGATGC GCGTTTAGGG CTTGCGGAAT GACGATGGGA CGACGACTGA CGCCAAGTGT TCGCTCGTCG CGCAGTGTTG ACCCGTTCAC GAAGAAGGAT TGGTATGATA TTAAGGCGCC GAGCATGTTC TCCGTGAGAA ACATCGGCAA GACGCTCGTG AGCCGCACGC AAGGGACCAA GGTAGGGCGC GCGCGAGATG AGGGTTAAAA GCCCTAGCGA ACGACGCGAC GCGACGCGGC GCGGATTCGA GGAACGGTTG ACTGACGATG ACGAACGATG TTTTGCGCGA AAATAGATTG CCTCCGATGG CTTGAAGGGA CGGATCTTTG AAATCTCCCT CGCGGACTTG AACAACGACG AGGACCAGAG CTTCCGCAAG ATGAAGCTCA AGTGCGAAGA CGTGCAAGGC AAGAACGTGT TGACGAATTT CGCGGGCATG GATTTCACCA CGGATAAGAT TCGCTCGTTG GTTCGTAAGT GGTTCTCTTT GATTGAGTGC TTCGTTGACG TGAAGACGAC GGATGGGTAC ACGCTTCGCG TGTTTTGCAT CGGTTTCACC AAGCGACGCA TGGATCAAGC CAAGCGCACG TGCTACGCGC AGAGCGCGCA GATTCGTAAG ATTCGCGCCA AGATGGTTGA AATCATCACG CGCGAGTGCA CGACGTGCGA CTTGAAGGAA CTCGTCTTGA AGTTCATCCC GGAGGTCATC GGCAAGGAGA TTGAAAAGTC TTGCGCCGGT ATTTACCCGC TTCAAAACGT GTACATTCGC AAGGTCAAAA TCTTGAAGGC GCCGAAGTTT GACTTGACCA AGCTCATGGA GGTGCACGGT GATTACAGCG GTGAAGCCGT CGGTGAGGCC GTGGCGCGAC CGGTCGAGGA GAAGGCTGAG GAAACTGCGG AGGCTGCGGA ATAAGTCGAT GACTTGATCC AAAGATGTTT CGTCGACGCC GGCGGCGTTT TTTGAAAGAC GTCGGCGACG CCGGCGAGCG CGACGACGCG CGAGTTGTCT CGCGCGTCAT CGTTTACGGG GGTGTTTGAA CGAATGAGGA GACATTTTTA CTAGACTGAA ATTCTCGCCG ATCTCATTTC GAGGG
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Protein sequence | MAVGKNKRMS KGKKGGKKKA VDPFTKKDWY DIKAPSMFSV RNIGKTLVSR TQGTKIASDG LKGRIFEISL ADLNNDEDQS FRKMKLKCED VQGKNVLTNF AGMDFTTDKI RSLVRKWFSL IECFVDVKTT DGYTLRVFCI GFTKRRMDQA KRTCYAQSAQ IRKIRAKMVE IITRECTTCD LKELVLKFIP EVIGKEIEKS CAGIYPLQNV YIRKVKILKA PKFDLTKLME VHGDYSGEAV GEAVARPVEE KAEETAEAAE
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