Gene OSTLU_28528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_28528 
SymbolRPS3a 
ID5006472 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009373 
Strand
Start bp20882 
End bp22316 
Gene Length1435 bp 
Protein Length260 aa 
Translation table 
GC content59% 
IMG OID640421893 
ProductRibosomal protein S3a, component of cytosolic 80S ribosome and 40S small subunit 
Protein accessionXP_001422366 
Protein GI145356290 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1890] Ribosomal protein S3AE 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value0.162919 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CCGCGCGCAT CGATCGCGCG TCATGGCGGT CGGAAAGAAC AAGCGCATGT CCAAGGGCAA 
GAAGGGCGGG AAGAAGAAAG CGTGCGTGCG CGACGCGACC CGAACGACCG CGAGGCGACG
CGCGAGGCGA CGGGAAGAGG ATCGATCGAC GCGACGGGCG AAAGAAGGAC GCGGGACGAC
GACGACGACG GGCGACGCCG GGGGGGGTGA CGGACGCGCG CGAAGCGCGA GGACGCGCGA
GAAGGCGCGA GACGGTGGAT CAAAATCGCG ACCGTCGATG GGGGGCGCGA CGGGCGCGCG
AGCGCGCGGG AGGAGGACGC GGGGGAGGGG GACGGCGACG CGATCGATGC GCGTTTAGGG
CTTGCGGAAT GACGATGGGA CGACGACTGA CGCCAAGTGT TCGCTCGTCG CGCAGTGTTG
ACCCGTTCAC GAAGAAGGAT TGGTATGATA TTAAGGCGCC GAGCATGTTC TCCGTGAGAA
ACATCGGCAA GACGCTCGTG AGCCGCACGC AAGGGACCAA GGTAGGGCGC GCGCGAGATG
AGGGTTAAAA GCCCTAGCGA ACGACGCGAC GCGACGCGGC GCGGATTCGA GGAACGGTTG
ACTGACGATG ACGAACGATG TTTTGCGCGA AAATAGATTG CCTCCGATGG CTTGAAGGGA
CGGATCTTTG AAATCTCCCT CGCGGACTTG AACAACGACG AGGACCAGAG CTTCCGCAAG
ATGAAGCTCA AGTGCGAAGA CGTGCAAGGC AAGAACGTGT TGACGAATTT CGCGGGCATG
GATTTCACCA CGGATAAGAT TCGCTCGTTG GTTCGTAAGT GGTTCTCTTT GATTGAGTGC
TTCGTTGACG TGAAGACGAC GGATGGGTAC ACGCTTCGCG TGTTTTGCAT CGGTTTCACC
AAGCGACGCA TGGATCAAGC CAAGCGCACG TGCTACGCGC AGAGCGCGCA GATTCGTAAG
ATTCGCGCCA AGATGGTTGA AATCATCACG CGCGAGTGCA CGACGTGCGA CTTGAAGGAA
CTCGTCTTGA AGTTCATCCC GGAGGTCATC GGCAAGGAGA TTGAAAAGTC TTGCGCCGGT
ATTTACCCGC TTCAAAACGT GTACATTCGC AAGGTCAAAA TCTTGAAGGC GCCGAAGTTT
GACTTGACCA AGCTCATGGA GGTGCACGGT GATTACAGCG GTGAAGCCGT CGGTGAGGCC
GTGGCGCGAC CGGTCGAGGA GAAGGCTGAG GAAACTGCGG AGGCTGCGGA ATAAGTCGAT
GACTTGATCC AAAGATGTTT CGTCGACGCC GGCGGCGTTT TTTGAAAGAC GTCGGCGACG
CCGGCGAGCG CGACGACGCG CGAGTTGTCT CGCGCGTCAT CGTTTACGGG GGTGTTTGAA
CGAATGAGGA GACATTTTTA CTAGACTGAA ATTCTCGCCG ATCTCATTTC GAGGG
 
Protein sequence
MAVGKNKRMS KGKKGGKKKA VDPFTKKDWY DIKAPSMFSV RNIGKTLVSR TQGTKIASDG 
LKGRIFEISL ADLNNDEDQS FRKMKLKCED VQGKNVLTNF AGMDFTTDKI RSLVRKWFSL
IECFVDVKTT DGYTLRVFCI GFTKRRMDQA KRTCYAQSAQ IRKIRAKMVE IITRECTTCD
LKELVLKFIP EVIGKEIEKS CAGIYPLQNV YIRKVKILKA PKFDLTKLME VHGDYSGEAV
GEAVARPVEE KAEETAEAAE