| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_37740 |
|---|
| Symbol | |
|---|
| ID | 5006112 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009370 |
|---|
| Strand | + |
|---|
| Start bp | 43600 |
|---|
| End bp | 46209 |
|---|
| Gene Length | 2610 bp |
|---|
| Protein Length | 849 aa |
|---|
| Translation table | |
|---|
| GC content | 60% |
|---|
| IMG OID | 640421533 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001421822 |
|---|
| Protein GI | 145355132 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG1199] Rad3-related DNA helicases |
|---|
| TIGRFAM ID | [TIGR00604] DNA repair helicase (rad3) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.689797 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0804873 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGACACA TCTACGACGC GTGCGAGCGA CGCGCGACGT TCGGCGCGTT CGAGAGCCCG
ACGGGCACGG GGAAGACGCT GAGCGTGTTG ATCGCGGCGA TGTCGTGGAT CGACGATCGA
CGACGGGCGC GGCTGGCGGG GACGAAGTTG GACGACGAGG ACGACGGGCG GGACGGCGCG
GGGGAGACGA CGAAGAGCGC GGAGGACGAC GAACCGGATT GGTTGCGAGA GTACGACGCG
AAGCGAAGGA AAACAGACGC GGATGAGGTC GAACGAAGAC GAGGGGAGAT ACGGCGGGAG
ATGCGAGCGA GGGCGAAGAC GGCGGAGACG CGCGCGCGGT TGCGGCGAGA CGCGGAGACG
CGGTTGAGAG AAAAGATTCG CGGCGGCGAC GCGAGGGACT CCGCGGTGAA GAACGATGAG
ATCGATAAGC ATACCGCGGA AGAGCGCGAG TTTTTAGCGG ATGAGTACGA CTCTGGGGCG
GAAAATGCGA AGGAGGATTT GCGAACGTTG CTGCGAGACG GCGACGACGA GAGCGACGAC
GACGACGCGC ACGCGGCGAA GGAGGAAGAC GATGCGTTGC GTCCGGCACA GCAGGTAATT
TTGTGCTCGC GGACGCACTC TCAGCTCACA CAAGTGATTG GTGAGCTTAA GAGGACGGTA
TTCGGTGGGA GCGTGGCGAA TGCGGAGGAA CAAGTCGCCG TCGCCGCCGT CGCCGGTCGA
GCGCAACTGT GCGTCAACCC GGCGGTGAAA AGCTTAGGCT CGGCGGCGCG AATCAACGAG
CGTTGCTTGG ACATGAGCAA AGGCAAGGCG AAGCCAGGGG AGAAGACGAA AATCAAGGCG
TGTCCGTACT TGTCTAAGCG TCGAAAGGCG ATGCTCGAGC TTAAAGAAGC GGCGTTGGCC
AAGCCGATGG ACATTGAAGA TTTAGCCAAG CTCGGCGAGT CGAGTCGGGC GTGTCCGTAT
TACGCCGCTC GCTCGGCGTT ACCGGAAGCG GACTTGGTGT TGATGCCCTA CGCATCTTTG
TTGCACGCGG ACACGCGCGA GATTTTAGGC GTCAAGTTGG AGAATGCGGT GGTGGTTTTC
GACGAGGCGC ACAACTTGGT GGACGCCGTG CACAATTCAT ACGGCGCCGC GGTGACGCTC
AACCAATTAA GCGACGTTAA CGACATGCTC ACCGAGTACG TCGAGCGATT CAAGACTCGT
TTGAGCGCGA ATAACTTGCG TTATCTGCGT ACGTTGACCA ACATAACGCG CGCGTTCGTG
AAAGTCCTCG CGAAAGAGAC GGAAGACGAG AGCAAACCTC AAAAACGATT GACGACGTTG
AATGATTTCT TGTTTGAGTG CGGACAAGAC ACTGTGAATA TGTTTAGCTT GCGAAGATAC
TTGAAGGAGA GTAAGGTAGC GCATAAGATC GCGTCGTATG GCGAGCGTGT GCGCTCGGGG
GAGAACATGA GCGTCGACGG CGTCAAGATG GAAACCATCG GACGTACGAA AGTCGCCGTC
GCGCCGGATC CAAATGCTGC CCCGCGCGTG GGCGCGGTGC ACGCGTTGAC GTCACTCATC
GATGCGTTAG CGAGCGCGGA TAGTGATGGT CGAATGATTT ACGAACGCGC CACGCCTGAA
GGTGATCCCG CAACGCTTCG TTTTGTCCTG CTTGACGCCG CCAGCCGGTT CAAGCGCGTC
GTCGAACAAG CGCGTTCGGT GATTCTCGTC GGCGGAACGC TCGCGCCGAT TCCCGAGCTC
GTCGCCCAGC TCTTCCCAGA TTTACAGTCG CAAACGGCTC CAGCACCGGG TGCTCGACAG
CTCAAGACGT TCACGTGTGG GCACATCATA CCCCGCGACA ACTTGTTACC CATCGCCCTC
TCCGCGGGTC CCACTGGCGT GGCGTTGGAT TTCACGCACG GCGCTCGCGC TGACGTTTCC
GTTATTGATG AACTCGGGAG AATCCTTCTC AACGCGTGCA GAGTCTCTCC TGGCGGAGCG
TGTGTCTTCT TTCCGTCGTT CAAATACGCC GACGAAGTGT ACGCGAGATG GGAGTCCACG
GGCGCCATGG CGTCCATTCG CGGCGTCAAG GACGTGTATC GCGAACCGCG CGACGCGAGC
ACTCTGGAGC AATGCTTGAG AGATTACGCG GCGTCAGTGA GCCGAGGCGC GAGTACGCGA
AACGGCGGCG CGGTGTTGTT ATGCGTCGTC GGAGGTAAGT TGAGCGAAGG CATCAACTTC
AAGGATGAAC TCGGTCGACT CGTCGTCATG GTCGGCTTGC CCTACGCCAA CGTCGCCGAC
GCCGAGCTCA AGGCGCGCAT GGACCATCTC GATACCGGTC CTGGGAACCA AGGACGCGGT
CGCGCGTATT ACGAAGCGTT GTGCATGCGA GGCGTCAATC AAAGCATCGG GCGCGCGATT
CGTCACGTCG GCGATTACGC GTGCATTTTG CTCTGCGACA AGCGATGGGG CGCGTTTGGG
AGCGCGACGA ACGGCTCGCG CACCAAGGCG GCCAAAGCAC TTCCAGAATG GATAGAACAA
CGACTTGTGG TGCCGCAGCG TAATTACGGT GAAGCGCACG GTCGCGTGGC ACAATTCTTT
CGCGCGCGCG AGGCGAAACA AGGACACTAG
|
|---|
| Protein sequence | MRHIYDACER RATFGAFESP TGTGKTLSVL IAAMSWIDDR RRARLAGTKL DDEDDGRDGA
GETTKSAEDD EPDWLREYDA KRRKTDADET RARLRRDAET RLREKIRGGD ARDSAVKNDE
IDKHTAEERE FLADEYDSGA ENAKEDLRTL LRDGDDESDD DDAHAAKEED DALRPAQQVI
LCSRTHSQLT QVIGELKRTV FGGSVANAEE QVAVAAVAGR AQLCVNPAVK SLGSAARINE
RCLDMSKGKA KPGEKTKIKA CPYLSKRRKA MLELKEAALA KPMDIEDLAK LGESSRACPY
YAARSALPEA DLVLMPYASL LHADTREILG VKLENAVVVF DEAHNLVDAV HNSYGAAVTL
NQLSDVNDML TEYVERFKTR LSANNLRYLR TLTNITRAFV KVLAKETEDE SKPQKRLTTL
NDFLFECGQD TVNMFSLRRY LKESKVAHKI ASYGERVRSG ENMSVDGVKM ETIGRTKVAV
APDPNAAPRV GAVHALTSLI DALASADSDG RMIYERATPE GDPATLRFVL LDAASRFKRV
VEQARSVILV GGTLAPIPEL VAQLFPDLQS QTAPAPGARQ LKTFTCGHII PRDNLLPIAL
SAGPTGVALD FTHGARADVS VIDELGRILL NACRVSPGGA CVFFPSFKYA DEVYARWEST
GAMASIRGVK DVYREPRDAS TLEQCLRDYA ASVSRGASTR NGGAVLLCVV GGKLSEGINF
KDELGRLVVM VGLPYANVAD AELKARMDHL DTGPGNQGRG RAYYEALCMR GVNQSIGRAI
RHVGDYACIL LCDKRWGAFG SATNGSRTKA AKALPEWIEQ RLVVPQRNYG EAHGRVAQFF
RAREAKQGH
|
|---|
| |