Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_27893 |
Symbol | |
ID | 5005754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009369 |
Strand | + |
Start bp | 384305 |
End bp | 385474 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | |
GC content | 64% |
IMG OID | 640421175 |
Product | predicted protein |
Protein accession | XP_001421645 |
Protein GI | 145354761 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0349] Ribonuclease D |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.70309 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGTCC CCAGCGCCGC GAAAAACATT CGCAACGCCG CCGCCCGGCT TCTCAGCGCC GAACCACCGC CTTCGGTCGC GTCCTCGGTC GTCGATCCGT TCGCGCTCCC TCCCGTGGAC GTCGCCTACG ACGTCGAGAG CGCCGAGCGC GCGCTCGCCC TGCGCGGCTT CGCGCCCTCC GCGGCGCCCG GAGCGCCGCG TTTCATCGGT TTCGACGTCG AGACGAAGCC GAATTTCACG AAAAACGTCG CCAACGTCAA CGCGCCGGCG CTGGTGCAGC TGGCGAACGA GCGCGGGTGC GTGCTGGTGC ACCTGGCGAG CATGCGCGGG GAGACGCCGC CGACGCTGCG AGCGCTGTGC GAGGACGCGG GGTCGATATT CGTCGGGAAC GGGGTGTGGT CGGACATGCG GGACGTCGAC TGGGCGTTCG GGACGAAATC GCGAGGGTAC GTCGACGTGG GGGTGATCGC GCAGACGTTT GGACACTCGA GACACGGGTT GAAGGCGATG AGCGCGAGAT ACGGATACGA CGCCGAAAAG CCGAAATCCG TGCAGACGTC GAATTGGGAA AAAAGCCCCC TGGAGGCGAA GCAGATCGAT TACGGGGCGA AGGACGCGGC GTTGGGGTTG TGGGTGCTGA AACAGTTGTA CGCGGAGTAC GCGGGAGGGG AGGTGTCGCT CGAGGATTGG GCGATGGCGT TTGGAAACGC GTCGCAGCCG AAGGAGGCGT TTCGGTCGGC GCGAGCGAAC GCGAAGACGA CGCCGGAGTG CGTGATGAAG GCGTTCGAGA GATTCGATCA GAAGAATCGA GAGTTGGTGA AAGAGGCGTG GTTGGTTCGT CAGATGAAAA AGGCCCAGCG CGTCGTGAAA CAGATGGCGG AGGGCGCGTT GCATCCGGTG AGCGCGACGC ACGCGTTGAT GGATATTTTG CATGCGCCCA AGTCGAAGCG CAAAGTCGTC GAGTGGGTGG GAAGTGGTAG TAAAGGTGGC GGACTGTTCG AGATCGAGCT CAAACTGGGC TCGTCCGTGC GCGCGCGCGG TGAAGGGCGC ACGGTGAAGG CGGCGAAATT CGAAGCCGCT CGAGGCGCGT TCGCCGCCTT AAAAGACGGG GACGCCGCCG ACGCGACGAT TTGGATCAAG CGCGAGTTAG AGCACGCTTG GTCGCAGTAG
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Protein sequence | MRVPSAAKNI RNAAARLLSA EPPPSVASSV VDPFALPPVD VAYDVESAER ALALRGFAPS AAPGAPRFIG FDVETKPNFT KNVANVNAPA LVQLANERGC VLVHLASMRG ETPPTLRALC EDAGSIFVGN GVWSDMRDVD WAFGTKSRGY VDVGVIAQTF GHSRHGLKAM SARYGYDAEK PKSVQTSNWE KSPLEAKQID YGAKDAALGL WVLKQLYAEY AGGEVSLEDW AMAFGNASQP KEAFRSARAN AKTTPECVMK AFERFDQKNR ELVKEAWLVR QMKKAQRVVK QMAEGALHPV SATHALMDIL HAPKSKRKVV EWVGSGSKGG GLFEIELKLG SSVRARGEGR TVKAAKFEAA RGAFAALKDG DAADATIWIK RELEHAWSQ
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