| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_27841 |
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| Symbol | |
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| ID | 5005652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009369 |
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| Strand | + |
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| Start bp | 265484 |
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| End bp | 268001 |
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| Gene Length | 2518 bp |
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| Protein Length | 808 aa |
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| Translation table | |
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| GC content | 55% |
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| IMG OID | 640421073 |
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| Product | RND family transporter: Niemann-Pick type C1 disease protein-like protein |
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| Protein accession | XP_001421614 |
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| Protein GI | 145354696 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.938041 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0539189 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTGCT CGATGTTGTT TTGCATCTTG TGCGCCGTCG GCTTGGGGGC GCCGGGATTG
AAGAATGAAA AGCGCGGCGA TAAGCTTTGG GTGCCGACCG ATACGCCGGC GCAGGGGGAT
AAGAATTACG TCGATGCGAA TTTTGGCTCG GAGACGCGCT TCGCGCAGGT GATTTTACGA
TCGACGACGA ACGGGGCGAA CGTGCTCACG CCGACGGGGT TGGCGGCGCT GGAGAACGTC
GCGGCGCGAG TGCGGAACGC GAATATCGCG TGGGAAGGTG CGACGTATAC TTATGCGCAA
CACTGTTACA AAATGGGGGC GACGTGCTAC GAAAAGAGCG TGCTGAACGC GTTTGCGAAC
GCCACGGCGT ACGGGTCGCA GTCGCTAATC GACGCGGCGC TGAGCGCGTC CCCGTTGACC
AGCGAGAACC CCAACGATGG ATCTACGGTG TTGTTGAAGA ACGTCGCCGG TGGAATAACC
ATGACTGGTG CCGTGCCGAG CGCCTCGGCG ATTTCTCTGA CGTACTTGTT CAAGAATAAC
GACGTGCTGA GGAACGGAGA TTACGTCGAT GAAAAGGGCG ACGCGTTTGA TAGCGTCGTG
CTCGATATTT TCGCCAATCC TCCGTCCGGT TTCAGCGCTT CATACGTCAC CGAACGATCA
TTTTCCGACG AATTTGGCAG CACAATTCAA AGTGATTTGC AAAAGCTTCA AATCGCGCTG
TTTTTGATTC TCGCCTACGC CGCGCTCACG CTCAGCAAAT GGAACATGGG ATGCGTCGGC
TCTCGAGTGG GCGTCACTCT CGCGGGTATC GTCTCCATCG GCATGGCCAT CGCATCTGCG
TACGGCATCG GTGCTTATTG TGGTCTCTTC TTCTCGCCGT TGATGAATGT TCTGCCGTTC
TTATTGCTCG GCATCGGCGT CGACGACATG TTTGTCATCG TAAACTCGTA CGACAACACG
GAGGCGCGCG TCGACCCGGT CGAACGCATG GGGCGGTCTT TGCGAGTCGC CGGGATGAGC
ATCACGGTCA CATCGGCCAC GGATGTCATC GCCTTTCTCA TCGGTTCGTC CACGTCGTTG
CCAGCGTTGA AGAACTTTTG CTTCTACGCG GCGCTCGGCA TCTTCTTTGA CTATCTCTAC
CAAATCACCT TCTTCACCGC TTTCTTGTCC ATCGACGAGC GAAGAAAGAG CGAAAACAAA
GCCGACTGCT TCTTTTGCTT GGACTGCCCT CCCGAGGCGT GCTGCGTGTG CTGTACGCCG
AAAAAAATGC CGAAGTCATT GCTGCAAATC GCTTTGGGCG ATGGTCTCGG TAAGCAACTC
GGAAAGAAGC CCGTCAAAAT TTTTGTCCTC GCGTTCTTCT CCGCCATCAC CGTCGGCGGC
ATCATCGGTT CGACGAAGAT GCAAGTCGAT GCGGACGTGA ACAATTTCAT CCCAGATGGA
TCATACTTGA AGAACTGGTT CGCCGACACA GACGCGTACT TTACCGAGTA CGGTGACGCG
GTCGAGATCT ACTCCAAGAG CACGCTCGAT TTGACGACGG AAGATTCCAT CTTGCGCGCC
GCCACGGCGG CGTTTACGGC GAATCCGTAC GTCATCAACG AATCCGTTCG TTCTTGGGTT
GACGACTTTT ACACATATCA CACCACTACC AATGGCGTGA CCGTGACGTC GCTCAACTAT
ATCCCATCGC TCAAGACCTG GCTCAGCACC GCTGCTGGGT CTCAGTACAA AAACGACGTC
GTGTTTGACG ACGAGACGTC GCCGACGGCC ATCGTCAGCA CGCGAATTCA CGGCAACCAC
ATAAAGACGG ACAAGTCGAA CGTCAACGTG CAGGCGATGG ATACGTTGCG CGCCGCGATT
AACGCTGTCA GTGGTAACAA CGGTCGAATT TTCGCCTTTG GTAGTCAGTG GTTGAATTAC
GAGCAGTACA AGTCGATCAC GAGCGAAGCC ATCAGGAATA TTTCCATCAC TCTCGCGGCG
TGCTTCGTCA TCATCGCCAT GCTCGTCATC GAGATTAAAA CCGTCGTGAG CGTGTCCTTG
GCGCTGACGA TGATTTTTGT CAACATCGTC GGTTACATGC ACTTCTGGGG TCTCACCATC
GATTCCGTGA CCGTCATCAT GCTCGTCATC GCTCTCGGAC TCGCCGTCGA TTACTCGGCG
CACATCGGTC GCGCGTACTT GGAAAAGACT GGCACCCCGG ACGAACGCAT CGTTCGCACG
CTCCAGGACA TGGGTGTCGC CGTCTGGAAC GGTGCGATGT CCACCTTCAT GGCTGTTCTC
ATCCTCGGCT CCTCCGATTC GTACGTCTTC CAAACCTTTT TCAAGCAGCT CTTCCTGTGC
ATCGTCCTCG GCTTGATGCA CGGCTTGATC TTCCTTCCGG TGGTGCTCTC CATGTTGCGT
CCCGCCGCGT ACGCCGAGGC CACGTGACCG AGCTCACCGA AATAATCTTA TTCTTTCGCA
TGCTTTCGTG CAATTTGTTC CGTTATCTCC GTGTAAAATC ACTCCGACAT ATAGAACG
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| Protein sequence | MLCSMLFCIL CAVGLGAPGL KNEKRGDKLW VPTDTPAQGD KNYVDANFGS ETRFAQVILR
STTNGANVLT PTGLAALENV AARVRNANIA WEGATYTYAQ HCYKMGATCY EKSVLNAFAN
ATAYGSQSLI DAALSASPLT SENPNDGSTV LLKNVAGGIT MTGAVPSASA ISLTYLFKNN
DVLRNGDYVD EKGDAFDSVV LDIFANPPSG FSASYVTERS FSDEFGSTIQ SDLQKLQIAL
FLILAYAALT LSKWNMGCVG SRVGVTLAGI VSIGMAIASA YGIGAYCGLF FSPLMNVLPF
LLLGIGVDDM FVIVNSYDNT EARVDPVERM GRSLRVAGMS ITVTSATDVI AFLIGSSTSL
PALKNFCFYA ALGIFFDYLY QITFFTAFLS IDERRKSENK ADCFFCLDCP PEACCVCCTP
KKMPKSLLQI ALGDGLGKQL GKKPVKIFVL AFFSAITVGG IIGSTKMQVD ADVNNFIPDG
SYLKNWFADT DAYFTEYGDA VEIYSKSTLD LTTEDSILRA ATAAFTANPY VINESVRSWV
DDFYTYHTTT NGVTVTSLNY IPSLKTWLST AAGSQYKNDV VFDDETSPTA IVSTRIHGNH
IKTDKSNVNV QAMDTLRAAI NAVSGNNGRI FAFGSQWLNY EQYKSITSEA IRNISITLAA
CFVIIAMLVI EIKTVVSVSL ALTMIFVNIV GYMHFWGLTI DSVTVIMLVI ALGLAVDYSA
HIGRAYLEKT GTPDERIVRT LQDMGVAVWN GAMSTFMAVL ILGSSDSYVF QTFFKQLFLC
IVLGLMHGLI FLPVVLSMLR PAAYAEAT
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