Gene OSTLU_89200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_89200 
Symbol 
ID5005425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009368 
Strand
Start bp619407 
End bp621464 
Gene Length2058 bp 
Protein Length685 aa 
Translation table 
GC content54% 
IMG OID640420846 
Productpredicted protein 
Protein accessionXP_001421341 
Protein GI145354119 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.564175 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGCGC CGCCGCCGCC GACGAACGAT CGGGACGATT ACTTGGCGGG GATGGATTTG 
CCGTCGAGCG ATAGCGATAG CGGAAGCGAA AAGGAGGTCG CACGCGAGGA GAAGGTGACC
GCGCTTCCGT CGGGACCGAC GGATAAACAA ATCAAGCGAC AGAGACAGAA AGAGATTGAA
GCGGCGCGTA AAGAGGCGCA GGCTAAAGCG GAGGCGATGA TGGAGGATGA TGACGCGTTC
AACGTGCGAA TTCCGAACAT GTCGGACGAA ATGATGGCGG CGATGGCGAA TAGTAGGGAT
ATTAAGATCG ACGGGTTCTC CGTGAGCGCC CGAGGGAAGC CTTTGTTGAC CAACACCTCG
TTGACGATCG CACACGGGCG GAGATACGGT TTGGTGGGTC CTAACGGTAC CGGTAAAACC
ACCGTGATGA AATTGCTCGC GAGGCGCAAA ATTCCCGTCC CAGAGCACAT CGACATTTTG
CTCGTCGAAC AAGAAGTTGT CGGTGATGAT CGCTCGGCGT TGCAATCTGT CGTCGCGGCC
GACGTCGAGT TGCAAGATTT ACGCAAGAAG AAGGTTGAGC TCGAAGACTT GATGGAGAAG
CTCGCCATCG GCGACTCGAG CGTGACGGAG CCCGTGTTCA AAAACGAAGA GACGGGCGAA
GAGAACGATT TGAACGCTGA GCTCAACAAA ACGTACGAAC GATTGAATGA GAAGGGAGAC
GCCACCGCAG AAGCGCGCGC GTCGAAGATT CTTCACGGTT TGGGTTTTAC GGTGCCGAAG
AAGGATGGTT CGCAAGGGCC GGATCGTTTC TCCATGCACA ACACTACGAA AAGCTTTTCT
GGTGGTTGGC GTATGCGCAT CTCCCTCGCC CGCGCGCTGT TCATCGAGCC CACGTGTTTG
TTGCTCGATG AGCCGACCAA CCACTTGGAT TTACGAGCTG TTATTTGGCT TGAAGAGTAT
TTGATGCGCT GGAAGAAGAC GCTCGTCGTC GTATCGCACG ATCGCGACTT CTTGTCCTCC
GTCACGACGG ATATCGTGCA CTTGCACGAC CACAAGCTCG ACCAATACAA GGGCTCATTC
GATCAATTCG AAGAGATGTA CGAGATTCGT CGTCGCGAGG CTAATAAGGC TTTCGAAAAG
TACGAAAAGG AGATGAAGGC GGCGAAGAAG GCGTCGAGCA AATCGAAGCA GCAAGATGTC
AAGGACAAGG CGAAGAAGGC CCAAGAGCGC AAACAAGGGA ATAAAAAGAA TAAGGGTATG
ATGATGGACG ACGACGACGA CGCGCCGTCA CAATTACCTG AGAAATGGGC CGATTACCAA
GTCAAATTTA GCTTCCCGAC GCCGACTGAG TTGCCTCCGC CACTCATTGG CCTGAACGAG
TGTTCGTTCG AGTATCCCGG ACTCAAAGGC TTTTCGTTGG ACAAAATCGA CCTTGGTATC
GATATGGGTA CGCGAGTGGC TATCATTGGC CCGAATGGTG CGGGTAAGTC TACGCTGATG
AATCTCTTAG CCGGCGACTT GGAACCAACG AGCGGGGAAT CGCGCCGTTC GCACGCGCTG
AGAATCGGTC GCTACTCTCA GCACTTCGTC GACGTCTTAG CCATGGACGA AAATCCAGTG
GAGTACTTGA GACGCAAGTA CCTGAAAGAG AACGGCTCTT CGTACAAGCC CGAAGAAATC
CGCGCCAAGC TCGGTCGATT CGGCTTGCCC GGGCACAACC ACTTGACACC GATCGTGAAA
CTTTCCGGTG GTCAAAAAGC TCGCGTCGTT TTCACAGCCA TCGGTCTATC CAACCCTCAC
ATCTTGCTTC TGGATGAGCC GACGAACCAC TTGGACATGC AGTCGATCGA TGCCCTCGCG
GATGCCTTGG AAGAATTCGA AGGCGGCGTC GTCATGATTA CGCACGACGC GCACATTTGC
GAACAAGTGC TCGACGACGA GAAGAGCGAG ATTTGGGTCG TCGACGAAGG TCGTGTCGAT
AAATTCAACG GCGATTTCGC GGAGTACCGC AAACAATTAG TCGCTGAAAT CGCCGCCGAG
CTCGACGACG AAAATTAA
 
Protein sequence
MRAPPPPTND RDDYLAGMDL PSSDSDSGSE KEVAREEKVT ALPSGPTDKQ IKRQRQKEIE 
AARKEAQAKA EAMMEDDDAF NVRIPNMSDE MMAAMANSRD IKIDGFSVSA RGKPLLTNTS
LTIAHGRRYG LVGPNGTGKT TVMKLLARRK IPVPEHIDIL LVEQEVVGDD RSALQSVVAA
DVELQDLRKK KVELEDLMEK LAIGDSSVTE PVFKNEETGE ENDLNAELNK TYERLNEKGD
ATAEARASKI LHGLGFTVPK KDGSQGPDRF SMHNTTKSFS GGWRMRISLA RALFIEPTCL
LLDEPTNHLD LRAVIWLEEY LMRWKKTLVV VSHDRDFLSS VTTDIVHLHD HKLDQYKGSF
DQFEEMYEIR RREANKAFEK YEKEMKAAKK ASSKSKQQDV KDKAKKAQER KQGNKKNKGM
MMDDDDDAPS QLPEKWADYQ VKFSFPTPTE LPPPLIGLNE CSFEYPGLKG FSLDKIDLGI
DMGTRVAIIG PNGAGKSTLM NLLAGDLEPT SGESRRSHAL RIGRYSQHFV DVLAMDENPV
EYLRRKYLKE NGSSYKPEEI RAKLGRFGLP GHNHLTPIVK LSGGQKARVV FTAIGLSNPH
ILLLDEPTNH LDMQSIDALA DALEEFEGGV VMITHDAHIC EQVLDDEKSE IWVVDEGRVD
KFNGDFAEYR KQLVAEIAAE LDDEN