Gene OSTLU_89194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_89194 
Symbol 
ID5005231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009368 
Strand
Start bp593538 
End bp594470 
Gene Length933 bp 
Protein Length310 aa 
Translation table 
GC content63% 
IMG OID640420652 
Productpredicted protein 
Protein accessionXP_001421332 
Protein GI145354100 
COG category[R] General function prediction only 
COG ID[COG1094] Predicted RNA-binding protein (contains KH domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.915191 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00870525 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACCCGA GCTCGGTGAC GGAGTACGTG ATGTGTCCGA ACGAAAGCGC GGGTAAGGTG 
ATCGGACACG GCGGGGAAAA GATTAACAGC ATACAAACCG AAAGCGGGGC CATCGTGAAG
ATTCAAAACC AAAACGAAGT CGGCCCGGGA CAACCGCGAA GGATCACGAT CAGTGGCGCG
CCCGAACGCG TCGCGCACGC GTCGCAGTTG GTGTACGCGA TCATCGGACA ATCAAGCGCG
AGCCGCGCGG CGCAGGCGCC GCGCGGCGCG GGCGGCGGTC GCGACGCGGC GGGCGCCGAG
ATTTTCGTCC CCGTCGAGCC GGACCAGTTC GGTAAGATTA TCGGTCGAGG CGGAGAGACG
ATTCGTAGGT TGCAAGAAGA GAGCGGCGTG CGCATGCAAG TCGATAGACC GAACAGTCGC
GTGCAAATCA CGGGCGACGC GTCGGGGTGT GAAGTCGCCC GAACGTTGCT TCAGGAAGTC
CTCGACGCGA CGAACGAACC CGTGGGAATG GGAACGTCGG GCGCGCAGTC CACGGAGATT
TCGGCGCAAG GCCAAGAGGG TCGAATCATC GGTAAGGGTG GGGAAAATAT TCGTTCGCTC
GCCGCGCAAA CCGGCGCGAA GCTGAGCATC ATCAAAGAGA CGGGCATGGT TCGCATCCAA
GGCGACCCGC GGCAAATCGA AGACGCCGTG CGCGCCGTCA ACGAGTTCAT CGACGCGCAG
GTGAACCCGG TCAAGTACCC CAACGCCGTC GGCGGCGGCG CCGGGATCCC ATCCAACGGC
GCGTATCACC CGCCCGAAGA TTCCGGCGGG TTGACGCCGT ACAAGCCCCT CTGGGAGACG
CACCAAAGCC CGGAGGGATA CACCTACTAT TACAACACCA CCACGGGCGA GACGACGTGG
GAAGAACCCG AGGACTACGA CGGGTTCAGC TGA
 
Protein sequence
MDPSSVTEYV MCPNESAGKV IGHGGEKINS IQTESGAIVK IQNQNEVGPG QPRRITISGA 
PERVAHASQL VYAIIGQSSA SRAAQAPRGA GGGRDAAGAE IFVPVEPDQF GKIIGRGGET
IRRLQEESGV RMQVDRPNSR VQITGDASGC EVARTLLQEV LDATNEPVGM GTSGAQSTEI
SAQGQEGRII GKGGENIRSL AAQTGAKLSI IKETGMVRIQ GDPRQIEDAV RAVNEFIDAQ
VNPVKYPNAV GGGAGIPSNG AYHPPEDSGG LTPYKPLWET HQSPEGYTYY YNTTTGETTW
EEPEDYDGFS