| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_27160 |
|---|
| Symbol | |
|---|
| ID | 5005172 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009367 |
|---|
| Strand | - |
|---|
| Start bp | 304300 |
|---|
| End bp | 304941 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | |
|---|
| GC content | 62% |
|---|
| IMG OID | 640420593 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001421111 |
|---|
| Protein GI | 145353632 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 84 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0714983 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGAAGC CGGATGACTG CGTGAGCGTG GGGAAGGGAA GCGATCCGAT GAAGTGGAGC
GCGGAGCGGC TGTGCGCGAC GGCGCTGACG CCGACGCCGG AGGGCGTCGA AGGCGCGTTG
TCGAGGCCTC GGCCGGTGCA TCGGTTGGAC GAACTCACGG GAGGATTGCT GGTGTGCGCG
AAGACGCGGA TGGCGATGAC GGCGCTGTCG GCGGCGTTCG AGAAGCGAGA AGTGCGGAAA
AGGTATCGGG CGGTGCTGCG AGGACGCGTC GAATCGAAGA AGGGGGTGGT CGACGTCCCG
CTCGGCGGTC TGGAGGCGCT CACCGAATAT AGCGTCGTGC GCGAGTACGA AAGCGAGGAA
TACGGCGGTA TCTTGACGTT GATTGATTTT TTCCCGAAAA CTGGGCGCAC GCATCAGCTT
CGGCGCCACG CCAAAGCGCT CTGCGCTCCC ATCCTCGGCG ACGTCAAGTA CGATTACGCG
TCGCGCGCTC ACGAGGACGG CTTGTTTCTG TGGGCCACTG GTATCGTGCT TCCGCCGAGC
GCCACGCCTT GGCGAGGAGA AGATTGTGGT GAATTAATTG TAGACATAGA AGAGGGCGAG
AAGTTTGCGC GCGTGCTCGC ACGTTGCCAA GAACTCGCGT AG
|
|---|
| Protein sequence | MVKPDDCVSV GKGSDPMKWS AERLCATALT PTPEGVEGAL SRPRPVHRLD ELTGGLLVCA
KTRMAMTALS AAFEKREVRK RYRAVLRGRV ESKKGVVDVP LGGLEALTEY SVVREYESEE
YGGILTLIDF FPKTGRTHQL RRHAKALCAP ILGDVKYDYA SRAHEDGLFL WATGIVLPPS
ATPWRGEDCG ELIVDIEEGE KFARVLARCQ ELA
|
|---|
| |