Gene OSTLU_39197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_39197 
Symbol 
ID5004700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009366 
Strand
Start bp404188 
End bp405192 
Gene Length1005 bp 
Protein Length334 aa 
Translation table 
GC content58% 
IMG OID640420121 
Productpredicted protein 
Protein accessionXP_001420841 
Protein GI145353045 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.023839 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0377209 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTGGG TCGAGAAGTA CCGCCCCAAG ACCCTGGACG ATCTCGTCGG GAACGACGAC 
GCGGTCGATC GCATGCGAAC CATGGTGCGG AGCGGCTTCA TGCCAAACTT GATCTTTTCC
GGTCCCCCGG GGTGCGGGAA GACGTCCGCG ATCGGCGTGC TGGCGCGAGA GCTGCTGGGA
GATAAATACA AGGAGGCGGT GCTGGAGATG AACGCGAGCG ACGAGCGAGG GATCGATGTG
GTGAGGAATA AGATTAAAAT GTTTGCGCAG AAAAAGGTGA CGCTCGCGCC GGGACGAACG
AAACTGGTGA TATTGGACGA GGCGGATAGC ATGACGACGG CGGCGCAGCA AGCGATGCGA
AGAACGATGG AGATTTACAG CGCGACGACG CGGTTTGCGT TGGCGTGTAA CACGAGTGAG
AAGGTGATCG AACCGATTCA GTCGCGGTGC GCGATCGTGC GGTTCGGGAA ACTGACGGAC
GCACAGGTTT TGAAGAGGTT GATGACCGTG GTGGAGGCGG AGAAGGTGAC GTACGTGCCG
AAAGGTTTAG AGGCGATCGT GTTCACCGCG GATGGGGACA TGAGACAGGC GTTGAATAAC
TTGCAATCGA CGGCGCTCGG TTTCGGGATG GTGAACGAGG AAAACGTGTT TCGAGTGTGC
GATCAACCGC ATCCGAACAT CGTGCGAGAC GCGTTTTCGT TCATTTTGCA AGGGAACGTC
GATGACGCGT ACGCGCGCTT GAAGTCGCTG CACGACCAAG GGTATTCGGT GTTCGACATC
ATCGGCACCA TGTACCGAGT GTGTAAAAAT TTTGACGATA CGGCGATGCC AGAGTTCATC
AAGCTCGAGT TGATTCGCAT CATAGGATTC ACGCATTTGC GCCTTTCCGA GGGATGCGCG
ACGATGATTC AGATCGGCGG CGGCGTCGCG CGCATGGTCG AGCTCGTGAG CGACGCGAAG
AAGATGGGCG GATACAGCGC CGAGCTCGGC CTAGACGCGC TTTAG
 
Protein sequence
MPWVEKYRPK TLDDLVGNDD AVDRMRTMVR SGFMPNLIFS GPPGCGKTSA IGVLARELLG 
DKYKEAVLEM NASDERGIDV VRNKIKMFAQ KKVTLAPGRT KLVILDEADS MTTAAQQAMR
RTMEIYSATT RFALACNTSE KVIEPIQSRC AIVRFGKLTD AQVLKRLMTV VEAEKVTYVP
KGLEAIVFTA DGDMRQALNN LQSTALGFGM VNEENVFRVC DQPHPNIVRD AFSFILQGNV
DDAYARLKSL HDQGYSVFDI IGTMYRVCKN FDDTAMPEFI KLELIRIIGF THLRLSEGCA
TMIQIGGGVA RMVELVSDAK KMGGYSAELG LDAL