Gene OSTLU_39090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_39090 
Symbol 
ID5004859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009366 
Strand
Start bp510333 
End bp510860 
Gene Length528 bp 
Protein Length176 aa 
Translation table 
GC content57% 
IMG OID640420280 
Productpredicted protein 
Protein accessionXP_001420714 
Protein GI145352778 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0349] Ribonuclease D 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value0.967738 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGAAG ACCACGCGCT CCAAGTCGTG GAGACGGTGG ATGCGTTGGA AGAGCTCGCG 
GCGCACTTGG AAGAGTGCAA AGAGTTCGCG GTCGATCTCG AGCATCACTC GTATCGGTCG
TTTAAGGGAT TTACGTGTTT GATGCAAATA AGCACGCGCG AGAGAGATTT CGTCGTCGAC
GTCTTGGCGC TTCGCTCGCA CGTGCGCGAC GCGCTCGGGA AGGCGTTCGC GGACGCTGAT
AAGCTCAAAG TGATGCACGG CGCCGATAAC GACGTGCAGT GGCTTCAAAA AGATTTCGGA
ATGTTCGTCT CGTGCTTGTT CGACACCGGT CAAGCCGCTC GCGTGCTCGA GTTGCCGAGC
AAAGGTTTGG CGTACCTGCT GCACCACTAC TGCGGTATCA AGGCAAACAA GCGGTTTCAG
CTCGCTGATT GGCGTCTGCG TCCGCTGACG AAAGAGATGG TGGAGTACGC GCGCGGAGAC
ACCCATCACT TGTTGTACGT GCACGACAGG TTGAAGGAGG CGCTTCGC
 
Protein sequence
MDEDHALQVV ETVDALEELA AHLEECKEFA VDLEHHSYRS FKGFTCLMQI STRERDFVVD 
VLALRSHVRD ALGKAFADAD KLKVMHGADN DVQWLQKDFG MFVSCLFDTG QAARVLELPS
KGLAYLLHHY CGIKANKRFQ LADWRLRPLT KEMVEYARGD THHLLYVHDR LKEALR