| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_25292 |
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| Symbol | PPR6 |
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| ID | 5004813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009366 |
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| Strand | + |
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| Start bp | 68543 |
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| End bp | 71685 |
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| Gene Length | 3143 bp |
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| Protein Length | 775 aa |
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| Translation table | |
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| GC content | 59% |
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| IMG OID | 640420234 |
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| Product | pentatrichopeptide repeat (PPR) protein |
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| Protein accession | XP_001420577 |
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| Protein GI | 145352494 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00756] pentatricopeptide repeat domain (PPR motif) |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.025628 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAGG TATTGGCGTG GACACCGGGG CGCAAGAATG ATGCGGAGAG ACTCTGGGGG
GAGATTTTTG AACGCGCGCG GGGCGACGCA AAGAGGCGAT GCGAGGCGCA CTGCGCGTTG
TTAGAAGCGC GGTGTTTGCG ACCGACGGCG GTGCATGAAT TCTTACGAGC GTACGATGCA
TTTCGAGACG AATTCCGCAA CGACGAGGGA TGGAAGAGTC GATGGATGAC GCCCATGGTG
CAACGCGCGT ACACGGCGGC GTGTCGGCTG TGCAACGACT CGCACGACGA GCGACTGGCG
AGGCGAGTGA CGTACGATTT ATTACGTGAC CACAAGCAAA TGAAAGCGGC GAATAATTTC
GCACTTGCGA CGGAGTATTG CGTGAGTTCG CTACTTTCTG CAGCAACGCC GAGCTCGGCG
CACGCGGCGG CTGAACTGTT TGAGGTTGCC CTCGAAGACG GCGTGAAATT CGGCGGCACC
GCTTGGTCGT ACGCGGTAAG CATGTACGCG GGAATGAACA AGGCGGACGA GGCAATCGCG
CTATTGGACC GTTTAGAAAC TTTGGATTTC ATGCAATCCG GTTCTCTCGG CGCTTTGGCT
TTCGCCGCCG CGTTTTCTGG CAAGAAGTCT GCCTCGTCCT CGGATGCGGT GATGAAATTG
GAGCGCCGCG CAAACGATTT GAAGATGGTC GAAGCGCGCA ACGCGAAGGA GCGCGCTAAA
GTGGAACGCG CTTACGCGCA GGTGATGCAT ATGCTAAACA AGCAAGAGCG ATTTAAGCTC
GCACTTCGCA TGTTCACTCG CATGCAATCC TCAGGCGTTC GCCCGCTCGG CGCGCAGACG
TACATCAACT TGTACGACGC GCTGAGTGAA ACACCCGCAG ATGACGCACT TTCTAAGAGT
AAACGCAGAG ACAATTTGCA TCGCGTCATG CAAACGGTAA AAACACACTT GAAGAGCTTA
GAGGCGCTCA TGGTTGGTAT TGAATTGGCG TCGCATGCCG GCGTCGCAGA CGTCTGCGAG
GATATTCAAG ACCGTCTACG TTGGAACGGG CACTTACAAA GCGACAGCGT TCGATCGAGG
GTGTGGCAGT GTATGATGAT CGTGCGATAC AAAACATACG ACAGACAAGG AACAATGCAG
CTCTACGAAG AGTGGCTGCG TTCGGGTGAG GAAAAAATCG CCGTCGGTGA TGACTTTTGG
TTTTATCTCA TCAAGTCGTA TTGCGACGAT CCCGTCAACG TGGACGTCGC GGCGCTCCTG
CTAGAGGACG CCATTCGTGA GAACGCCATG GTGAGGCGTA AAACGGTCCC AGTACGGACG
TTCAATATTG TTATTCAAGC GTGCGCGCAA GATCGACGCC CAGCGCTCGC GCTGACCGTC
ATCGATCGTA TGCGCGCCGC CGGCGTCAAT CCCACAGACG TGACGTATTT AGCCGCCCTA
CGCGCGTGCG CGTCGGCGGC AAAAATAGAC CGTCGACGGG ATGAAAAGGC TGAAAATGAC
TCCGAAGAGT CGCTCGTGAG GGTAGCGCGG ACGTTGATTG TGACCGCGTG CACAGAAGGA
ATTCAGCCGA CGAGCAAGAT GTGGAGCGCG GCGCTACACG TCTGCGCTCT GTGCGGCGAT
GTCGCCGCGG CGACGGAAAT CTTTGCGGAC ATGCGCGCTA GTGGATCTGC GCCAAACGTG
CACAGTTGTA CCGCGCTTAT GCGTGCGTAC GCTAGCGTGC GAGACTTGAG CGGTGCGATT
GACGCGTACT GGACCATGAG AAACGAATTC GACGTCGCGC CGGATTCAAG CACGCTACAA
ACGATGCTCG AAGTCGTCCG CGCCGCCGGG CACAACAAAT CCCGAGGAAC TAGTGACGTC
ATATCGCGAG TGCAAGAAGT GTACGCCGAC ATGCGCGCGC TCAACGTCCG TCCGAACAAC
GCCGTCTTAT CCCTGCTCAC GGAATCCGTC GTGGAGGACG TCTTGGCGCT TGGCTCGCCG
AATTCAGCCA TCGACGTCAA GCGTCTCACC TTGGCCATCG ATGGCTGCGT CAGCGTGGAA
TCCGAGATCA CGCAAACTTG GGACGATATC GCATCGATGA ATCTCAAGGA GTACTCCGTC
GCCGAGGCAC GGGTCGCGTT TTTGGGTCTA TTGCAGACGC TTCGCGATCG CCGCGCCGCT
CGATTGCGCG TCGGCGACGT CCGCGTCGGT GTTGGTCGCG GTAAAATTCG TGATTCCATC
GAAACCTTGG CCAGGGACGT AAGTTTGATG TTGTCTTACG CCGAAGACGA CGATGGTGTC
GTGGTGTTGA CGTCCGCGGC GATCGAGCAC TGGTTCGCCA AGCCGTAGCG TCGAATCGGC
GCCGATTCGA CGACGTCGAG ACACACCTCG ACGCGCCATG TCGCGAAGAT TTCTTCGTCC
CGCGCCCGCG CTCGTCCTGG CGCTCGTCTT AGCGACAATG ATCGACGGCA CGCACGCCGT
GAAACGGGCG TACGCGACGA AACCGCGTCG GGAGGACAAC GAAACGTTCA ACGTTTTCGA
CGCGAGCGCG CGGCGAGTCG CGCTCCCGAG TGAACTCTCG CGCGCTGTCA CGCGCGTGAC
TCGCGTCGTC GTCCCTGGAG ACGTGCACGT GCGCGCGCCA AATGCGCTCG ATCGCGTGTT
TCGCGCGTAC GCGCTCGCGA CGAACGAAAC GATGGTTCGT CTGGAAAAGC GGCGGCGGAG
GCAGAGGCAG CCGATCGGCG ACGGCGACTC CGCAAAGACG ATCAATCTTC TCGTGCGGAA
ATTCGCGAGA ACCAACGATG CGCGACGCGC TAGTTGGCGC GTCGTCGATG CCATCGTCGG
TGAGGGCGAA AGCGCGTGGG TCGTGTTCGA GACGTGCGAC GATGATTGGA TCGACGACGA
CGAATCGATC GGTATCGGTT TTGACTATCG CCTGCGCGTC GATTTCGTCA ACTCGAGCGC
GGCGACGACG GGTGATATCG CGGCGTTCAT CGCCACGACA GATCCCGCGC GCACCGGAGG
CAAGTCTCGA CGGTGTGCTC GGAGACGTGC GTACGGGTGA CGCGTCGACG CGCGAATTCC
GCCGCGGGGT TCGTTCGCGC GCGCGCTCGC ATTCATCTAT TCATTCATTC ATTCATTCAT
TATTCATTCG CCCGCGCGCT CGC
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| Protein sequence | MAKVLAWTPG RKNDAERLWG EIFERARGDA KRRCEAHCAL LEARCLRPTA VHEFLRAYDA
FRDEFRNDEG WKSRWMTPMV QRAYTAACRL CNDSHDERLA RRVTYDLLRD HKQMKAANNF
ALATEYCVSS LLSAATPSSA HAAAELFEVA LEDGVKFGGT AWSYAVSMYA GMNKADEAIA
LLDRLETLDF MQSGSLGALA FAAAFSGKKS ASSSDAVMKL ERRANDLKMV EARNAKERAK
VERAYAQVMH MLNKQERFKL ALRMFTRMQS SGVRPLGAQT YINLYDALSE TPADDALSKS
KRRDNLHRVM QTVKTHLKSL EALMVGIELA SHAGVADVCE DIQDRLRWNG HLQSDSVRSR
VWQCMMIVRY KTYDRQGTMQ LYEEWLRSGE EKIAVGDDFW FYLIKSYCDD PVNVDVAALL
LEDAIRENAM VRRKTVPVRT FNIVIQACAQ DRRPALALTV IDRMRAAGVN PTDVTYLAAL
RACASAAKID RRRDEKAEND SEESLVRVAR TLIVTACTEG IQPTSKMWSA ALHVCALCGD
VAAATEIFAD MRASGSAPNV HSCTALMRAY ASVRDLSGAI DAYWTMRNEF DVAPDSSTLQ
TMLEVVRAAG HNKSRGTSDV ISRVQEVYAD MRALNVRPNN AVLSLLTESV VEDVLALGSP
NSAIDVKRLT LAIDGCVSVE SEITQTWDDI ASMNLKEYSV AEARVAFLGL LQTLRDRRAA
RLRVGDVRVG VGRGKIRDSI ETLARDVSLM LSYAEDDDGV VVLTSAAIEH WFAKP
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