| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_4215 |
|---|
| Symbol | |
|---|
| ID | 5004300 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009365 |
|---|
| Strand | + |
|---|
| Start bp | 16477 |
|---|
| End bp | 17610 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | |
|---|
| GC content | 58% |
|---|
| IMG OID | 640419721 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001420235 |
|---|
| Protein GI | 145351767 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
|---|
| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | AGGTACTGCG CGCCGTACGA CTTTGACTTT GTGTGCGGCG TCAAGGCGCG GTGGGCGGGA
CGGAGGCTGT GCGATTTATT CGCGAGTGAG TTTCCGATGC GACCGAAAGA GTATTACGTG
AAAGCACACG CGATGGGACG GTTGTGCGTG GAGGCGAACG GGTGCGCGCG GACGAACGGG
GAGGAGACGA CGACGAAGAC GACGAACGAG GCGCGAGAAC ACGAAGACGG GCCGATGCTC
GCCGGAGGAA ACCGCGTGCG ACACTTCATA CACAGGCATG AACCTCCCGT GATGGCGGAT
GAAGTGCGCG TGTTGACTGT CAATGATGAC GTCGTATCGG TGTGGAAACC GGCGACGGTG
CCCGTACACC CCACGGGGCA ATACAGGCGA AACACGGTGC TCGCTTTGCT GGCGGCGTCG
CGTAGGGATT TGGGACGGTT ATTTCCCATT CACAGGCTCG ATAAGAACGT GTCGGGGTTA
CTCTTGCTTG CACGTTCGTC AGAAGCCGCG AATGAGATGC GAGTGAAGAT GGAGGCGCGA
GAGATGCGGA AGGAGTACGT CGCGCGCGTG CGAGGAGCGT TCAACGACGG TGACGCGACG
CCGGTGTCAA ACGTAGAGAG TTTAGGATTC GATAGCAAAG GCCGTGTGGC GATTTGGCGC
GGAAAAAAAG GTGTCACCGA TCTCGACGAG CGGACTTTGA AGTCATTCAA GGATGCGTCT
ACGAAATTTA CGTGTATTAA GACGCTCGTT GACGGGACTT CGCTCGTGCG ATGCGAACCC
TTCACCGGAC GCTCGCATCA AATACGAGCG CACTTAGCCA TGCTCGGGTA TCCAATCGCA
AATGATGTCG CGTATGGGGG TGCATTGGTC GAAGTTGAGC GCGCTCGAGC GATTCAGCAC
GCGTGCGACG TCACCGTGCT GAACGAAGCG GGCGAATTAG TCAAAGACGA GTCGCTCGCC
ATCGATTACT CCGCTCCCCG CAAGAGCCGG GAGCAGAGCT CCGATTTGTG TCCACACTGC
CCGAGAATCG TGCACGCTGG AGACCAGGCA ATCGACCTAG AGGCGATATG GTTACACTGC
GTGCGATATA GCGGCGAAGG GTGGGAGTTT GAGTGTCCGA TGCCAGACTG GGCT
|
|---|
| Protein sequence | RYCAPYDFDF VCGVKARWAG RRLCDLFASE FPMRPKEYYV KAHAMGRLCA REHEDGPMLA
GGNRVRHFIH RHEPPVMADE VRVLTVNDDV VSVWKPATVP VHPTGQYRRN TVLALLAASR
RDLGRLFPIH RLDKNVSGLL LLARSSEAAN EMRVKMEARE MRKEYVARVR GAFNDGDATP
VSNVESLGFD SKGRVAIWRG KKGVTDLDER TLKSFKDAST KFTCIKTLVD GTSLVRCEPF
TGRSHQIRAH LAMLGYPIAN DVAYGGALVE VERARAIQHA CDVTVLNEAG ELVKDESLAI
DYSAPRKSRE QSSDLCPHCP RIVHAGDQAI DLEAIWLHCV RYSGEGWEFE CPMPDWA
|
|---|
| |