Gene OSTLU_37948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_37948 
Symbol 
ID5004006 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009364 
Strand
Start bp307305 
End bp308029 
Gene Length725 bp 
Protein Length179 aa 
Translation table 
GC content60% 
IMG OID640419427 
Productpredicted protein 
Protein accessionXP_001420140 
Protein GI145351559 
COG category[K] Transcription 
COG ID[COG1095] DNA-directed RNA polymerase, subunit E' 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0428372 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTTTC ACGTCAACCT CGAGCGTAAC ATCACGCTCG AACCGCGACA CTTCGGGGCG 
AGGATGAAGG CGGTGCTGGA GGAGAAACTG CGACACGAGG TGCGGCGGCG CTCGAGCGAA
GCGAGGGAGA GGCGCGGCGG CGTCGAGGAC GTCTGGCGCG CGGGTGAACC CTAAGACGGC
CGCGGACAAC GAAGGATAGA AGGCGCGCGC GCGACGCGCG GCGAAAGGAT AGAAGGCGTG
AAAGAGGTGA CTGACGCGAG TGATGGTCGC TTGAACGATC GCAGGTCGAG GGCACGTGCT
CGGGAAGGTA TGGGTTCATC GTCATGGTCA CGCGGCTGGC GGAGGTGAGC GAAGGCGTGG
TGACGGACGA CGGCACGGCG CGAGCGAAGT TTCACATCAA GTACGATTGT GTCGTGTTTC
GCCCGTTCAA GGGCGAGGTC ATGGACGCGG TTGTGACGCA GGTGAATAAG TTTGGATTCT
TCGCCGAGGC TGGGCCGCTG CAGTTGTTCG TGTCGAACGC GCTCATCACG GAGGACATGC
AGTTTGATAG CTCGGGGGAA AATTGTTACG TGAGCGACGA CCAGCAGATT AGAATCCAAC
GCGACGCATC CGTGCGAGTG CGCATCGTCG GCATGCGCAT CGACGCGAAC GACATTTTCT
GCATCGCGAC GATTAAGGAT GATTATTTGG GTCTCATCGA TTTCGGCTCG GGGGGCGGGA
TTTAA
 
Protein sequence
MFFHVNLERN ITLEPRHFGA RMKAVLEEKL RHEVEGTCSG RYGFIVMVTR LAEVSEGVVT 
DDGTARAKFH IKYDCVVFRP FKGEVMDAVV TQVNKFGFFA EAGPLQLFVS NALITEDMQF
DSSGENCYVS DDQQIRIQRD ASVRVRIVGM RIDANDIFCI ATIKDDYLGL IDFGSGGGI