Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_37948 |
Symbol | |
ID | 5004006 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009364 |
Strand | - |
Start bp | 307305 |
End bp | 308029 |
Gene Length | 725 bp |
Protein Length | 179 aa |
Translation table | |
GC content | 60% |
IMG OID | 640419427 |
Product | predicted protein |
Protein accession | XP_001420140 |
Protein GI | 145351559 |
COG category | [K] Transcription |
COG ID | [COG1095] DNA-directed RNA polymerase, subunit E' |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0428372 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCTTTC ACGTCAACCT CGAGCGTAAC ATCACGCTCG AACCGCGACA CTTCGGGGCG AGGATGAAGG CGGTGCTGGA GGAGAAACTG CGACACGAGG TGCGGCGGCG CTCGAGCGAA GCGAGGGAGA GGCGCGGCGG CGTCGAGGAC GTCTGGCGCG CGGGTGAACC CTAAGACGGC CGCGGACAAC GAAGGATAGA AGGCGCGCGC GCGACGCGCG GCGAAAGGAT AGAAGGCGTG AAAGAGGTGA CTGACGCGAG TGATGGTCGC TTGAACGATC GCAGGTCGAG GGCACGTGCT CGGGAAGGTA TGGGTTCATC GTCATGGTCA CGCGGCTGGC GGAGGTGAGC GAAGGCGTGG TGACGGACGA CGGCACGGCG CGAGCGAAGT TTCACATCAA GTACGATTGT GTCGTGTTTC GCCCGTTCAA GGGCGAGGTC ATGGACGCGG TTGTGACGCA GGTGAATAAG TTTGGATTCT TCGCCGAGGC TGGGCCGCTG CAGTTGTTCG TGTCGAACGC GCTCATCACG GAGGACATGC AGTTTGATAG CTCGGGGGAA AATTGTTACG TGAGCGACGA CCAGCAGATT AGAATCCAAC GCGACGCATC CGTGCGAGTG CGCATCGTCG GCATGCGCAT CGACGCGAAC GACATTTTCT GCATCGCGAC GATTAAGGAT GATTATTTGG GTCTCATCGA TTTCGGCTCG GGGGGCGGGA TTTAA
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Protein sequence | MFFHVNLERN ITLEPRHFGA RMKAVLEEKL RHEVEGTCSG RYGFIVMVTR LAEVSEGVVT DDGTARAKFH IKYDCVVFRP FKGEVMDAVV TQVNKFGFFA EAGPLQLFVS NALITEDMQF DSSGENCYVS DDQQIRIQRD ASVRVRIVGM RIDANDIFCI ATIKDDYLGL IDFGSGGGI
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