Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_26048 |
Symbol | |
ID | 5004048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009364 |
Strand | + |
Start bp | 140860 |
End bp | 141984 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | |
GC content | 64% |
IMG OID | 640419469 |
Product | MFS family transporter: multidrug efflux |
Protein accession | XP_001419913 |
Protein GI | 145351076 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00479795 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGACGC TGAACCTGCC GCTGGGGCGG GCGACGGATC GATACGGAAG GAAACCGCTG ATGATGGGAG GGATGGTGGT GATGGCGCTC GCGGACGTGG GAACGGCGAT GTCGAGGAGC GTCGCGGCGC TGGTGCCGAT GCGGATGCTG CTGGGAGTCG GACGCGCGGG GTGCGAGTGC GGAGACAGGG CGTATCTGGC GGATTTGTGC GCGCGGGTGC CGGAGAAGCG AGGAATCATC GTCGCGGGAC AGAGCACGGT GCACGCGGTT GGGTTGGTGA TAGGACCGTT GTTAGGAGGG AGATTGATGG AGGCGTACGG TGCGCCCGCG GCGTTTTATT ACGTCGCCGC GGCGGCGGTC GGGACGGCGA TCGGGTATTC GTTTTTGCCC GAGACGCTCA CGGAGGAGAC GCGCGAGGCG GCGGAATTAA AGGCGACGAT GGACGAGGAG GACGGAGGAA TGTTTGAAGG GCTTAACCCT TTCATGTCGA GCGACGAGCG CGAAGAGTTG CGGGAACGCA AGAGTCAGCG CGAGTCGAGC AGTTGGTTGA CGCTGTTGGC GAATCGCGAG CAGCGCGTGT TGTTGTTGTG TGCGTCGGCG AATTCCCTGG GTTTCGTCGC CAAGCTCACC GTGATTCCGC TCTACGCCTC CGGGCACCTG GACGCGTCGC CCGCGGAGGT TGGAAACTTG TTCTCCATCA CCGCGTTGTT AGGTCTGGCG ACCGCCCCGC TGAGCGGTTT GGCGGCGGAT AAATTTGGCA AAAAAGTCGT CGTCGGCGCC GCGCTCGCCG CGTGCGCCAC GGGTTTGTTC TTCGGCGCCC AGTCGCAGAC GCAATCTGAG TTGATATTTT TCATCGGCGC GTGGGGCATC GGGACCGCCG CGGCCGGTCC CGCGATCAAC GCCCTCGCGC AAGAGCTCGC CCCCAAGGGT GGCGAAGGCG AAGCCCTGAC GCTTCCGAAA TCCGCCGCCG ATTTCATCTT CCTCATCGGA CCTCTCGTCC TCGGCGTATT GGACGATTTC ATCGGTACCG ACAACGCCGG CATGATCTTA TGTTCCTCCG CCGCCGCCAT CGCCGCCGCG AGTTGTTTCT TTCTCCCCGC CGCCGTCGAG CGCGTCGACC GTTGA
|
Protein sequence | MLTLNLPLGR ATDRYGRKPL MMGGMVVMAL ADVGTAMSRS VAALVPMRML LGVGRAGCEC GDRAYLADLC ARVPEKRGII VAGQSTVHAV GLVIGPLLGG RLMEAYGAPA AFYYVAAAAV GTAIGYSFLP ETLTEETREA AELKATMDEE DGGMFEGLNP FMSSDEREEL RERKSQRESS SWLTLLANRE QRVLLLCASA NSLGFVAKLT VIPLYASGHL DASPAEVGNL FSITALLGLA TAPLSGLAAD KFGKKVVVGA ALAACATGLF FGAQSQTQSE LIFFIGAWGI GTAAAGPAIN ALAQELAPKG GEGEALTLPK SAADFIFLIG PLVLGVLDDF IGTDNAGMIL CSSAAAIAAA SCFFLPAAVE RVDR
|
| |