Gene OSTLU_26048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_26048 
Symbol 
ID5004048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009364 
Strand
Start bp140860 
End bp141984 
Gene Length1125 bp 
Protein Length374 aa 
Translation table 
GC content64% 
IMG OID640419469 
ProductMFS family transporter: multidrug efflux 
Protein accessionXP_001419913 
Protein GI145351076 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00479795 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACGC TGAACCTGCC GCTGGGGCGG GCGACGGATC GATACGGAAG GAAACCGCTG 
ATGATGGGAG GGATGGTGGT GATGGCGCTC GCGGACGTGG GAACGGCGAT GTCGAGGAGC
GTCGCGGCGC TGGTGCCGAT GCGGATGCTG CTGGGAGTCG GACGCGCGGG GTGCGAGTGC
GGAGACAGGG CGTATCTGGC GGATTTGTGC GCGCGGGTGC CGGAGAAGCG AGGAATCATC
GTCGCGGGAC AGAGCACGGT GCACGCGGTT GGGTTGGTGA TAGGACCGTT GTTAGGAGGG
AGATTGATGG AGGCGTACGG TGCGCCCGCG GCGTTTTATT ACGTCGCCGC GGCGGCGGTC
GGGACGGCGA TCGGGTATTC GTTTTTGCCC GAGACGCTCA CGGAGGAGAC GCGCGAGGCG
GCGGAATTAA AGGCGACGAT GGACGAGGAG GACGGAGGAA TGTTTGAAGG GCTTAACCCT
TTCATGTCGA GCGACGAGCG CGAAGAGTTG CGGGAACGCA AGAGTCAGCG CGAGTCGAGC
AGTTGGTTGA CGCTGTTGGC GAATCGCGAG CAGCGCGTGT TGTTGTTGTG TGCGTCGGCG
AATTCCCTGG GTTTCGTCGC CAAGCTCACC GTGATTCCGC TCTACGCCTC CGGGCACCTG
GACGCGTCGC CCGCGGAGGT TGGAAACTTG TTCTCCATCA CCGCGTTGTT AGGTCTGGCG
ACCGCCCCGC TGAGCGGTTT GGCGGCGGAT AAATTTGGCA AAAAAGTCGT CGTCGGCGCC
GCGCTCGCCG CGTGCGCCAC GGGTTTGTTC TTCGGCGCCC AGTCGCAGAC GCAATCTGAG
TTGATATTTT TCATCGGCGC GTGGGGCATC GGGACCGCCG CGGCCGGTCC CGCGATCAAC
GCCCTCGCGC AAGAGCTCGC CCCCAAGGGT GGCGAAGGCG AAGCCCTGAC GCTTCCGAAA
TCCGCCGCCG ATTTCATCTT CCTCATCGGA CCTCTCGTCC TCGGCGTATT GGACGATTTC
ATCGGTACCG ACAACGCCGG CATGATCTTA TGTTCCTCCG CCGCCGCCAT CGCCGCCGCG
AGTTGTTTCT TTCTCCCCGC CGCCGTCGAG CGCGTCGACC GTTGA
 
Protein sequence
MLTLNLPLGR ATDRYGRKPL MMGGMVVMAL ADVGTAMSRS VAALVPMRML LGVGRAGCEC 
GDRAYLADLC ARVPEKRGII VAGQSTVHAV GLVIGPLLGG RLMEAYGAPA AFYYVAAAAV
GTAIGYSFLP ETLTEETREA AELKATMDEE DGGMFEGLNP FMSSDEREEL RERKSQRESS
SWLTLLANRE QRVLLLCASA NSLGFVAKLT VIPLYASGHL DASPAEVGNL FSITALLGLA
TAPLSGLAAD KFGKKVVVGA ALAACATGLF FGAQSQTQSE LIFFIGAWGI GTAAAGPAIN
ALAQELAPKG GEGEALTLPK SAADFIFLIG PLVLGVLDDF IGTDNAGMIL CSSAAAIAAA
SCFFLPAAVE RVDR