| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_5923 |
|---|
| Symbol | |
|---|
| ID | 5003107 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009362 |
|---|
| Strand | - |
|---|
| Start bp | 532886 |
|---|
| End bp | 533764 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | |
|---|
| GC content | 67% |
|---|
| IMG OID | 640418528 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001419412 |
|---|
| Protein GI | 145349999 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1562] Phytoene/squalene synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.918435 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TCGACGAGCG CGTCCACGGA CGATCTGCGC GCCGCGTTTC GTCACTGCGT CGAAATCGTT
CGCGCGAGAG ACTACGAAAC CTATCTCTGC ACGCTCGCCC TGCCCCGCGC GAGCGCGCCC
GCGGCGTTCG CCGTGCGCGC GCTGAACGCG GAGACCGGTT CGGTGGTCGG GAACGCGGAA
TCCGTCGACG CGGCGGTGGC GCGGTTGATG TGGTGGCGAG AGACGATGAC GGCGGGGAGC
GCCGGGACAC GGGCGGGTCA CCCGGTGGCG CTCGCAACGC TCGCAGCGCT GGGAAACGAG
CCGAACGCGC GCGCGAGAAC TTGGATGCGA CGAATGATTG AGGCGAGGAT CGCGGACGCG
CGCTCGGATG GACCGCCGCG GACGATTGCA GATCTAGAGC GGTATGCGAG CGACGCGCAC
GGGAGCGCGT TGACGCTCGC GCTCGACGCG TGCGGAGTCA GGAATGCGGA CGCGGATCAC
GCGGTGAGTC ACTTAGGGCA AGCGATAGGA CTAAGTGCGT TATTGCGCGG TACCGTGGCG
CACGCGAAAC AGCGTCGATG TTACTTACCG AGCGACGCGT GCGCGCGGCA CGGGGTGAGC
ACCGAGAGCG TCTATCGCAT GGAGCCGAGC GAGGGCGTGC GTAACGTCGC GCACGAAGTC
GCGAGCGCGG CCAAGGGGCA TTTAGATAGC GCGCGCGCGA TGGCGAGCAG AGTTCCCGAC
GACGCCAAGC CGTTCCTTCT GCAAGCGGTC CCCGTTGGGA GGTATTTAGA CGCGCTCGAG
GCGAGAGATT TCGACGTTTT CGACGAAGCC GTCGCCAAGG GCGGCGCCCC GCTCTTGACG
CAAGGCGCCA TCGCCTGGCA CGCGTTCAAA CGCGCGTAT
|
|---|
| Protein sequence | STSASTDDLR AAFRHCVEIV RARDYETYLC TLALPRASAP AAFAVRALNA ETGSVVGNAE
SVDAAVARLM WWRETMTAGS AGTRAGHPVA LATLAALGNE PNARARTWMR RMIEARIADA
RSDGPPRTIA DLERYASDAH GSALTLALDA CGVRNADADH AVSHLGQAIG LSALLRGTVA
HAKQRRCYLP SDACARHGVS TESVYRMEPS EGVRNVAHEV ASAAKGHLDS ARAMASRVPD
DAKPFLLQAV PVGRYLDALE ARDFDVFDEA VAKGGAPLLT QGAIAWHAFK RAY
|
|---|
| |