| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_42838 |
|---|
| Symbol | |
|---|
| ID | 5003337 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009362 |
|---|
| Strand | - |
|---|
| Start bp | 102588 |
|---|
| End bp | 104006 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | |
|---|
| GC content | 69% |
|---|
| IMG OID | 640418758 |
|---|
| Product | MFS family transporter |
|---|
| Protein accession | XP_001419283 |
|---|
| Protein GI | 145349734 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.183784 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.513972 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCGC GCGGGGAATC GCCGTCCGAC GACGACGTCG ACGACGCCGC GAGCGCCGAG
GCGCTGCTGG GACTCTTCAT GCTCGTCAGC GCGCTGGTGT ACGTCGATCG AGGGATCGCG
AGCTCGGCCG CGGTGAGCGG GGCGCCGAGG AGCGCGCGCG AGCCCGCGGG GCGAGGCTTG
CAGGGCGCGC TCGGGTGCTC GTACGCGGCG TACGGAGCGC TGAACGCGGC GTTCATGATC
GGACTGCTCT CGGGCGCGCC CGCGTTCAGC GCGATGGCGA ATAAAGCGTG CGCGTTCAGA
TTGATCGCGA TCGGGCTGGC GATGGCGGCG GTGGGGGAGC TCGGATGCGC GCTGGCGCCG
ACGTGCGGGT GGGCGTTCGC GGCGCGCGCG CTGGTGGGCG CGGGAGAGGC GAGTTTTATC
GCGCTCGCGG CGCCGTTCAT CGATGATAAA GCGCCGAAAG GCGCGAAGAC GATGTGGTTG
GCGATGTTCT ACGCGTGCGT GCCGTTCGGG GTGGCGTTCG GGATCGCGTT CGGGGGGGCG
GTGACGCCGG CGATGGGGTG GCGATGGGCG TTCGGGTTGA ACGCGTGCGC GATGGCGCCC
GCGGCGGCGT ACTGCTTCTG GCGTCCGGCG GTGCGCATGC GAGGCGTCGG AGGCGATGCG
AATGCGCGCG AGGCGGCGGC GACGTCGACG GTGGCGTCGT TGACGCGCGC GTTCGCGCGA
GATTGTAAAG AGTTGTTCGT GCGCGAGACG TACGTCGTCG TCGTGCTCGG GTACGCCGCG
TACACCGCCG TCATCGGCGT GTACGCGGCG TGGGGACCGA AAGCCGGGTT CGCGATATTT
CGAGATGAGT TACACACGTC GACGAACGCG GACATGCTCC TCGGTGCGAT CACCGTCGTG
AGCGGGATCG CGGGCACGCT TCTCGGCGGC GGCGTCGTGG ACAAGTTGGG GAGCTCGACG
GCGACGGCGT TGCGCACGTC CGCCATCGCC GCCGTCGGGG GATTCGTGTG CCTCGAGCTC
GCTTTCAGGT GTCAAACGTT CGCATCGTTC GCGGTGTGCT TGCTCATCGG ACAAATGTTC
GCTTTCGCGT TACAGGCGCC GATCAACGCC GTCGTGCTCT GGAGCGTCCC CGCGCGTCTG
CGCCCGCTCG CGTGTTCGAT GACCACCGTC ACCATTCACC TCTTCGGCGA CGTCCCATCG
CCGCCGCTCT TCGGGCACTT CCTCGAGCGC GATGGCGCCC CCACGCCCGA GCGCTGGCGA
ACCATGTGTT CGACGTTCAC GCTCTTATTC GTCGTCGCCG CGGGCGTCTT CGCGACGGCG
GCGCGGCGAG CCGGCGGCGA CGCGCGCCGA CAACGCGTCT TAGACGACGA CGACGACGAC
GACTCGCGCG ACGTCGACGA CAGGCTCTTA CCGACGTAG
|
|---|
| Protein sequence | MTPRGESPSD DDVDDAASAE ALLGLFMLVS ALVYVDRGIA SSAAVSGAPR SAREPAGRGL
QGALGCSYAA YGALNAAFMI GLLSGAPAFS AMANKACAFR LIAIGLAMAA VGELGCALAP
TCGWAFAARA LVGAGEASFI ALAAPFIDDK APKGAKTMWL AMFYACVPFG VAFGIAFGGA
VTPAMGWRWA FGLNACAMAP AAAYCFWRPA VRMRGVGGDA NAREAAATST VASLTRAFAR
DCKELFVRET YVVVVLGYAA YTAVIGVYAA WGPKAGFAIF RDELHTSTNA DMLLGAITVV
SGIAGTLLGG GVVDKLGSST ATALRTSAIA AVGGFVCLEL AFRCQTFASF AVCLLIGQMF
AFALQAPINA VVLWSVPARL RPLACSMTTV TIHLFGDVPS PPLFGHFLER DGAPTPERWR
TMCSTFTLLF VVAAGVFATA ARRAGGDARR QRVLDDDDDD DSRDVDDRLL PT
|
|---|
| |