Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_33296 |
Symbol | |
ID | 5003106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009362 |
Strand | + |
Start bp | 699263 |
End bp | 701167 |
Gene Length | 1905 bp |
Protein Length | 634 aa |
Translation table | |
GC content | 58% |
IMG OID | 640418527 |
Product | predicted protein |
Protein accession | XP_001419251 |
Protein GI | 145349670 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 80 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCAGG TCCCGTTGCG ATTCGACAAC GCACGAGAGT ACGTGCGAAC GTACGCCCCG TTCGTGCTCG CTGAGTGCGA CGAACACGTG CGCAGACGAA GCGGCGAGGG GACGAGCGTG AAGGCGGAAG CGGCGCGCGC GGCGGAGCGG GACGAAGAGT TTCACGTCGT CGCGTTCGAC GTGAGCGAAA CCGATTCGGA ACGACTCTCG GATAACGATT TAGTGCTACT GAGCAAGGAA GAGTTGACCG CGAAGGTGAC GGAGGACGCG AGGTTGACGC ACGCGCTCGC CGTCGTCGAT GGCCGCGAAA TGAAAACTCG AGTGCGCCTT CGACTATACC TCCCAGATAC AACAATGACG ACGGAAGCGC GAGTGCATAG TGAGAGCGAT TACAAGCGGT TTCGCACCGT TCGCAACGCG CTCACCGCGG TGAAGGGCGA GCGTTGGTTC CTGAAGAGTT TGGCAAACTT GTCCACGTTC ACGCGCGAGT GGCTAGCGAT TCACGCCTTT CCAGCGTTCC CCTACGCGGC GACGATTCTT AACGGCACTC CCGCGGCGGG CATCGGCGGT CCGTCTTCCG TCAACGCGTG GAGTATGCCC GACGGCTTGA AAACTTTCGT CGAGCGCTCT TGCAACGATT CGCAAATCAA GGCGTTAGAG AGCGCGTTAA CGCGAGAGCC CTTGGTGCTC GTTCAAGGTG CTCCGGGGAC TGGGAAGACG CGCACGATCA TTCCTCTGCT GTCCGTGCTG TTGCACTCCG TTCCGAGCAC GTCTTCGAGG ACGATCGTTG ATTTTAAGGC GTACGCCAAG ATGCGAGAGG CGCGCGTGGT AGCCACAGCT GAGGAGAAGC GCGAAGCTTG GATGCGCGCT TCGCCATGGT TGCGGACAAC TAATCCGCGC GACGCACCAC CGCCACCGAC GCTCGTGGCG GAGAAAGTGA GCGGATCGGT AAACGCCGAA TCGAATGTGT CTCCGTCTTC CAAGCCGTCG AGCAATGGCG CCGTGAGAGT CGTCGCGCAA ACATTGGGCG CCGACGCCTA CAGACGATCA AAGATTCTCG TGTGTGCGCC GTCGAACGAG ATTTTAGATG AAATCGTGTC GCTTATCATC AAGACCGGTC TCGTCGACGG TAATGGCGAG ACGTACTCAC CGACTGTCGT CCGCGTTGGC GTAAACGTAC ACGACTCGGT GCGACAAGTC AGCATGGATG CACTCGTTTC ACAACGATTA GGAGAGTTGG GCGCACACGT TGATTCGGTG CGCAAATTCG AAGCGGCCGT CGAACGCGAC AGGTTGAAAC AGGCAATTTT GGACGAAGCG AACGTGGTGT GTAGTACGCT TTCATTTAGC GGCGCGGGTA TGTTCGCCAG GATGTCTACG CCGTTCGACG CCGTCATAAT CGACGAGGCT ACGCTAGCGG TCGAGCCTTC AACGCTTGTA CCGCTGTGCT ACGGGGCGAA GCAAGTGTAC TTGATCGGTG ACGACCGAGA ACTGGCTGCG ACTGTCCTGA GCTCAGCCGC CGTCGAGTAC AAGTACGACG TGTCCATGTT CAGCCGATTC CGTAAGTGCG ATTATCCCGT GCACTCGCTC ACTGCGGATA AGACGACAGG TAAGCGGAAA TCAACGACGG CGTCTGAAAA GAAGCGCCAC ATGCACGATC CTCATTGGAG CGGCGCGGCG GAGTTTATTC GCACGAATGA GCTCAACACC GCCGACGGAG GGTTCTCAAA AGAAGGTTTC CGTGACGAAT TGATCGTAGA AAACACGAAG AAGGGTGAAG CCGTCGGTGG TGATGAAATG CTCGCGGACG TCGAAGACGG CGACGATTCG AATCGCGACG CTTTCACCGA CTCGCCGGAC GAACCAGCGA AAAAGAAACA GACACGACGG TCGACGCGAG CGTAG
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Protein sequence | MTQVPLRFDN AREYVRTYAP FVLAECDEHV RRRSGEGTSV KAEAARAAER DEEFHVVAFD VSETDSERLS DNDLVLLSKE ELTAKVTEDA RLTHALAVVD GREMKTRVRL RLYLPDTTMT TEARVHSESD YKRFRTVRNA LTAVKGERWF LKSLANLSTF TREWLAIHAF PAFPYAATIL NGTPAAGIGG PSSVNAWSMP DGLKTFVERS CNDSQIKALE SALTREPLVL VQGAPGTGKT RTIIPLLSVL LHSVPSTSSR TIVDFKAYAK MREARVVATA EEKREAWMRA SPWLRTTNPR DAPPPPTLVA EKVSGSVNAE SNVSPSSKPS SNGAVRVVAQ TLGADAYRRS KILVCAPSNE ILDEIVSLII KTGLVDGNGE TYSPTVVRVG VNVHDSVRQV SMDALVSQRL GELGAHVDSV RKFEAAVERD RLKQAILDEA NVVCSTLSFS GAGMFARMST PFDAVIIDEA TLAVEPSTLV PLCYGAKQVY LIGDDRELAA TVLSSAAVEY KYDVSMFSRF RKCDYPVHSL TADKTTGKRK STTASEKKRH MHDPHWSGAA EFIRTNELNT ADGGFSKEGF RDELIVENTK KGEAVGGDEM LADVEDGDDS NRDAFTDSPD EPAKKKQTRR STRA
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