Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_32550 |
Symbol | CSD2 |
ID | 5002809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009361 |
Strand | - |
Start bp | 230376 |
End bp | 230945 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | |
GC content | 64% |
IMG OID | 640418230 |
Product | copper/zinc superoxide dismutase-like protein |
Protein accession | XP_001418878 |
Protein GI | 145348894 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2032] Cu/Zn superoxide dismutase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGGCGC TGCACGCGTC CGCGAGCGTC GCGTGGGCGG GCGAGGCGAC GTACGCGGCG AGGCTGACGC CGACGCGCGC GGGCGCGGGG GCGAGCGGCG AGGTGGAGTT TTCGCTGGAG ACGAACCGCG CGAACCAGGA GGTCGTGGTG GTGCGAGCGA ACGTTCGAGG GTTGACGCCG GGGAAACACG GGATCAACGT GCACGAGAAT GGGGACGTGA GCGGGTGCGA CGACGCGGGC GCGTGCACGG GGAAGAGCTA TAATCCCGAT AAGCGACCGC ACCACGGACC GACGGCGTTG AAAAAGTTTG GCGCGAGCGC GTGCCACTTC GTGGGCGATG GATGCGTGCT GAACAGACAC ATTGGAGATC TAGGAAACAT CGTCGCGGAC GAAAATGGCG ATTCGACGAC GAGTTTCAAG GATTTGTACA CGACGCTGAA GGCGGGTACG TCGAACTCCA TCGCGGGGCG TTCCGTCGTG ATCCGAGCGA CAGCCGACGA TTTCGAGACG GAAGAAGATG ACGGCGGGGC CGGGCCGATC GTTCTCTACG GTTCAATCGT GCGAAAGTAG
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Protein sequence | MVALHASASV AWAGEATYAA RLTPTRAGAG ASGEVEFSLE TNRANQEVVV VRANVRGLTP GKHGINVHEN GDVSGCDDAG ACTGKSYNPD KRPHHGPTAL KKFGASACHF VGDGCVLNRH IGDLGNIVAD ENGDSTTSFK DLYTTLKAGT SNSIAGRSVV IRATADDFET EEDDGGAGPI VLYGSIVRK
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