| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_24879 |
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| Symbol | PPR5 |
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| ID | 5002738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009361 |
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| Strand | - |
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| Start bp | 774010 |
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| End bp | 775358 |
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| Gene Length | 1349 bp |
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| Protein Length | 424 aa |
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| Translation table | |
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| GC content | 63% |
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| IMG OID | 640418159 |
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| Product | pentatrichopeptide repeat (PPR) protein |
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| Protein accession | XP_001419038 |
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| Protein GI | 145349220 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00756] pentatricopeptide repeat domain (PPR motif) |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CCGCAACGAC GCGCGTCGAC GCCATGGCGC CGCACCCGCG TCGCGCCGCG GGCGCGAAGA
CGCCGCGCGA GGCGAAGAAG AAGCCGTCGT CGGGTAAGCG CGCCGGGTAC AAGCCGCACG
GGTCCGTGGT GTACGAGACG ACGGAGGCGC TGTCGCGAAT CGCTGAAAGC GCGCTCGACG
CGAACGAGCG GCGCCGCGCG ATTTTCGATG CGCTGGCGCG CGCGATGAGC GCGGACGATA
ATCCGCGACC GCTGCGCGCG GACCCGCGGG CGTTCACGAC GTTCATCTCG CGATTGAATC
GAGGGAAACG CTTCGACGCG GCGTTGGACG TCTTCGCGGC GCAAAAGGCG CTCGGCGTCG
AGCGAAACGC GGTGAATTAC AACGCCGCCA TGGTGGCGAA CGTCAAGGCG GAGAAACCTG
AAGAGGCGTT GAAGTTGTTC GAAGAGATGC GCGAGATCGG GCACGAGCCG AGCGTGATAT
CTTTCAACGT CGCCATGGGG GCGTGCGCGC GCGCGGGCGA CGGCGCGCGC GCGTTGAAAC
TTTTCGACGA GATGGTGGGG CAGAACATGG ACGTGGACGC GGTGAGCATC AACACCGCAA
TGGCGGCGGC GGAGTTGGTC GGTGATGAGG CGCGCTTGGA AGAACTGCGC GCTGGGTCGC
ATTTCAAGCG CGCGGGCGAC GTCGACGAGC CGGCGCCGAC GCGAGTCGTT AAAGACGACG
CGAAGAAAGA CAGCGACGCG AGCGACGACG AAGATAGCGA CGACGACAGC GACGACGACA
GCGACGAAGG CGAGCCGGAA GCGGTAGCAG ACGACGTCGG CGACGCGAAT GTGGTTTTGA
GTGAAGAAGA AGAGGCGAAG CGCGCGGCGG CGAGAAAGCG CAAGCGCGAG ATTAAGAAAA
AGTTATTAGC CGAATACGCC GCGAACGTCG GCGGTGCCCG CGACGACGAG GACGAGGAGA
TGGCGAAGCG CCGTCGAAAA GACGAGCGAC GAGCCAAGTT TGAGGAAAAA CGGCGCGCGC
GGAAAGAGGC GACGCGCGCG AAGAGACCTT GGTCCGCCGC CGCCGCGCAC GCGAAGAAGA
AAGAAAATAA GACGTCCAAG GCGGCAAAGC GCACGGCGAT GAAGGCGGAT CCGAAAGTTT
GGATCGAAGA CGTTCCTTCC GAAGATGAAG TTCTGTACGA CGACGATGGT GAACGCGTTT
TGCCCGCGAT CAAAGGTCCT TCGTTTCTCG ACGACCCAAA CGCGGCCAAG CTGATGAACG
CGTCCGGCGG CGAAGACTTT TGGTCGGTTG GATTCTAGCA ATGGTTACAC TGGTTACACG
AGTAAAATAC TTCCTAAAAT AGCGATAGA
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| Protein sequence | MAPHPRRAAG AKTPREAKKK PSSGKRAGYK PHGSVVYETT EALSRIAESA LDANERRRAI
FDALARAMSA DDNPRPLRAD PRAFTTFISR LNRGKRFDAA LDVFAAQKAL GVERNAVNYN
AAMVANVKAE KPEEALKLFE EMREIGHEPS VISFNVAMGA CARAGDGARA LKLFDEMVGQ
NMDVDAVSIN TAMAAAELVG DEARLEELRA GSHFKRAGDV DEPAPTRVVK DDAKKDSDAS
DDEDSDDDSD DDSDEGEPEA VADDVGDANV VLSEEEEAKR AAARKRKREI KKKLLAEYAA
NVGGARDDED EEMAKRRRKD ERRAKFEEKR RARKEATRAK RPWSAAAAHA KKKENKTSKA
AKRTAMKADP KVWIEDVPSE DEVLYDDDGE RVLPAIKGPS FLDDPNAAKL MNASGGEDFW
SVGF
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