| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_4131 |
|---|
| Symbol | |
|---|
| ID | 5002189 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009360 |
|---|
| Strand | - |
|---|
| Start bp | 704619 |
|---|
| End bp | 705494 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | |
|---|
| GC content | 62% |
|---|
| IMG OID | 640417610 |
|---|
| Product | BASS family transporter: sodium ion/bile acid |
|---|
| Protein accession | XP_001418553 |
|---|
| Protein GI | 145348219 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0385] Predicted Na+-dependent transporter |
|---|
| TIGRFAM ID | [TIGR00841] bile acid transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.275751 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGGAG GGAACGCGCA AAAATCGGCG ACGGCGCGGA AGAAGGCGAT GGAGAAGGCG
CAGAAAGCCG GGGCGGGGTC GCAGCTCGCG GCGAACGCCA AGGCGATGTC GACGGTGTGT
CAAGTGTGCC GCGCGAGCTT CATGTGCACG CTCGCGCCGA TTAAGCTGAA GGAGCACAGC
GATAATAAAC ACCCGAAACA GACGTTCGAG CATTGCTTTC CGGGCGTGAG CCTGTGA
|
|---|
| Protein sequence | FPVFVALGAL AGMCAPGTVS WFRGDAVTYA LAGTMLGMGI TLDLSDFRAV FGQPWKIGMG
VALQYTVMPT LAFLVGKMFL ANQSLAAGLI LVGCCPGGTA SNVVTFLAGA SVPLSVVLTT
VSTFMATVMT PTLTQHLAGT MIPVDGGGLF VSTCKVVLLP VVAGLVLKKY APKFSETLEP
FAPITAVLTV ALICASIIGR TSTQILAAGP TLIAAVALLH TLGFGLGYFL SRSAGFSSKT
SRTMSIEVGM QNSALGVVLA SAHFADPLVA VPCAISATVH SVLGSMLAAF WR
|
|---|
| |