| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_32343 |
|---|
| Symbol | |
|---|
| ID | 5002521 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009360 |
|---|
| Strand | + |
|---|
| Start bp | 708510 |
|---|
| End bp | 709903 |
|---|
| Gene Length | 1394 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | |
|---|
| GC content | 61% |
|---|
| IMG OID | 640417942 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001418310 |
|---|
| Protein GI | 145347721 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1222] ATP-dependent 26S proteasome regulatory subunit |
|---|
| TIGRFAM ID | [TIGR01242] 26S proteasome subunit P45 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0415891 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | CCGCGCGTCG GTGAAGCGCG CCCGTCGTCG ACGCGCGCGC GACGCGCGCG CGGGAGACGC
GAAACGAACG ACGCGCGCGA GGCGATCGCG CGCGCGGCGA ACGACGCGCG ATGGACCTGG
ACGCCGCGTT CGATGACGAT CAAACGCGCG CGCTCGCGGA GCTCGAAAAC GCGCCGCTCG
ACGACGTCCT GGCGCGGGCG CGCATGCTCG AGCACGAGCT CCGCGTGCTG CGCGATGAGA
GCAATCGCCT GAACCTGGAG TGCCAGGGCG AGCGAGAGCG GGTGAAGGAC AACGAGGAGA
AGATCAAGCT GAATAAGCAG CTGCCGTACT TGGTGGGGAA CGTGGTGGAA CTCTTGGACT
TGGCGCCGGA GGAAGAGGAG CTGGAGGATC AAGCGACGGC GGACGTGGAC GCGCAGCGAC
GAGGGAAGGC GGTGGTGCTG AAGACGACGA CGAGGCAGAC GATATTCTTG CCCGTGGTCG
GGTTGGTGGA CGCGGAGACG CTGAAACCGG GGGACTTGGT GGGGGTGAAT AAGGATTCGT
ATTTGATTTT GGACACGCTT CCGGCGGAGT ACGATTCGCG AGTGAAGGCG ATGGAGGTGG
ACGAGAAGCC GACGGATGAT TACACCGACA TAGGGGGGCT TGAGAAACAA ATTCGGGAGA
TGCGGGAAGC CATCGTGTTG CCGATGACGC ACGCGGCCAA GTTCGCGAAA CTCGGTATTC
GACCGCCGAA AGGGGTGCTT TTGTACGGAC CGCCCGGGAC GGGAAAGACG TTGATCGCGC
GAGCGTGCGC GGCGCAGACG AACGCGGCGT ATCTCAAGCT CGCGGGGCCG CTGTTGGTGC
AAATGTTCAT CGGCGACGGC GCAAAGTTGG TGCGAGACGC GTTCGCGTTG GCCAAGGAAA
AGTCGCCAGC CATCATCTTC ATCGATGAGA TCGACGCCAT CGGGACCAAG CGTTTCGATT
CCGACACCAA CGGTGATCGC GAAGTCCAGC GCACGATGTT AGAGCTCCTT AATCAGCTCG
ATGGGTTCTC GAGCGACGAT AGAATCAAAA TCATCGCCGC CACGAACCGA GCCGATATTC
TCGATCCCGC GCTCATGCGC TCCGGTCGAC TCGACCGTAA GATCGAGTTC CCTCATCCGA
ACGAAGATGC TCGAGCGCAA ATCATGAAGA TCCACTCCCG CAAGATGAAC GTTAACCCCG
AGGTGAACTT TGACGAGCTC GCTCGCGGCA CCGAAGATTT CAACGGCGCC CAGCTCAAAG
CCGTGTGCGT CGAAGCCGGC ATGCTCGCCC TCCGTCGCGA CGGCACGGAG ATCACGCACG
AAGATTTTAA CGAGGGTATC ATCCAAGTTC AGGCTAAGAA GAAGGCTGAC TTGTTTTACT
ACGCCTAGTT AGCG
|
|---|
| Protein sequence | MDLDAAFDDD QTRALAELEN APLDDVLARA RMLEHELRVL RDESNRLNLE CQGERERVKD
NEEKIKLNKQ LPYLVGNVVE LLDLAPEEEE LEDQATADVD AQRRGKAVVL KTTTRQTIFL
PVVGLVDAET LKPGDLVGVN KDSYLILDTL PAEYDSRVKA MEVDEKPTDD YTDIGGLEKQ
IREMREAIVL PMTHAAKFAK LGIRPPKGVL LYGPPGTGKT LIARACAAQT NAAYLKLAGP
LLVQMFIGDG AKLVRDAFAL AKEKSPAIIF IDEIDAIGTK RFDSDTNGDR EVQRTMLELL
NQLDGFSSDD RIKIIAATNR ADILDPALMR SGRLDRKIEF PHPNEDARAQ IMKIHSRKMN
VNPEVNFDEL ARGTEDFNGA QLKAVCVEAG MLALRRDGTE ITHEDFNEGI IQVQAKKKAD
LFYYA
|
|---|
| |