| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_32043 |
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| Symbol | |
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| ID | 5002356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009360 |
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| Strand | + |
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| Start bp | 175037 |
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| End bp | 178202 |
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| Gene Length | 3166 bp |
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| Protein Length | 889 aa |
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| Translation table | |
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| GC content | 57% |
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| IMG OID | 640417777 |
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| Product | predicted protein |
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| Protein accession | XP_001418171 |
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| Protein GI | 145347434 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00756] pentatricopeptide repeat domain (PPR motif) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0485159 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0952764 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CCCGCGCGAC GCGCGACGCG CGACGCATCG CGAACGAGCG CGCGACGCGA CGGTCGATCG
ACGAAACGCG TCTCGACGCG CGCCGACGAC TCGCGACGGG CCCGGACGCG CGAGCCGAGC
GCGAGGGCGC GGTGAAGACA CGAACGGGGG ATTGACCGCG CGGCGGCATG AGCGCGACGG
CGAGCGCGCG CGGCGGCGCG GGATATGCGC GGGATGGACG CGCGAGCGCG CGAACGATGC
GAGGGATGCG AGCGCGACGA ACGACGGGCG TCGGGACGCG CGGCGGTGGA CGCGGGACGA
GGGAAGAGGG AGGAACGGCG GCGTCGCGCG CGCGAGGGTG CCCCGCGACG ACGACGCGGG
CGATATCCGA GGACGCGGCG TTCGGCGCGA AGGAGGCGTC GAACGCGAGC GGGAAGATCG
CGAAGGGCTA TGGACGGTGG TCGACGATGA CGCTGGGGGA GCTGATCGAT CGCGCGGGGG
AGCTCGAGGC GAAAGTGGAC GGGACGCGCG CGAACGAGTC GGAGTACTTT TACATTTTTC
GCGAGTTGGT GCGATGTAAA AGACTTCATG ATTCGGTGGA TTTATTGAAG CACATGAAGG
AGCGAGGGGT GAAAGAGCTC GGGCGAAGAG TGTCGCACAG AGACTTCTTC AGCGCGTGTC
GTTCGCTGCG CGTTGTGTCC GTCGGATTTG AGTTCGTGGA CGTCATCGAG AGCGGAGACA
TTCGACCGTA CAACATGTTG GTGCACGCAT GCGCCACGGC GGGGGATTTA CAAGCGGCGA
CGCTGGCGAT AGAGAAGATG AAAAATGCGG GATTTGAGCC TGATTTACAA GCGTACACCA
CGCTTCTTGG AGCTTGCTCA AAGTGTGGGG ACGTCGAACG CGCGTTCGAG GTGTACGCCG
AACTCAAGAG GGCGGGGTTT GAGCCAAACG AGAAGACGTA CGGATCGATG ATCGACGCCA
TCTCGCGAGA CCTTGCGACG TCTCTTAAGG GTTCGAGGAA GAGACGAGTA GACTCCGAAC
ACGTTCGTTC GACTTTACAA AGCTGTTTCA TGATTTTTGA GGAGATTAAA ACCACGAATA
TGAAGCTGGA TAAGATAGTG ATGAATAGCT TGCTCACCGT GTGCGCTCGC GCGGCGGTGG
TTCCGAGTGT GCGCAAAGAA GCTTGCGAGA AAGTGGCGAT GGTACACGAC GAAATGATTG
AGCGTGGCTT TGAGCTCGAC TCTTACGCGT ACCAGGCTCT CATCTGCTGC GCCTTGGCTG
AGAAGAATTA CACGAGGGCT TTTGAGTACT TTGACGAGAT GCACGACGCC GGTATCAATG
GTACCACCGA AGTATACACA GTGATGATCA GAGCGTACGG GAAGCTTGGT AAAGCTGATA
AAGCTAAGCT GATCTGGTAC GCCATGTTGG AGGATAACAT CATTCCGGAT CAAATGAGTT
ACGCGACGAT GATGCGACTC GCCCTGTTGG ACGAGGACGA CGATTTCTGC GACGAGCTGA
TGACGTCCAT GAGACGCAAT CGCGTCCGCC CAGGGCCTGA GTTGTACTCT ACGCTCACTG
GTGTGGCCGC GCGACAAGGC GATGCTTCAC AGGTGGAAGA GATCATGCAA AACGCGAAGA
AGCGAGGCGT GGTGGCTCCC ATCGAATGCT ACAACTCGCT CATCGCCGCG CACGCTCGCG
CCGACCGGCC AGATCTCGCC GTCGAGGCTG CGGGCAAGCT CGAAGCGGCT GGGTACGAGC
TTGACGCTAT TTCATACGAA GGACTTATTT TCGCGTACGC TTTCGCGAGA GATGTCGAAG
AAGCAAGTAA CATGTTTGAG CGTCTCCTCG AGTCTGGTAT TCGCCCGACA TTCCCGACAT
TCAACTGTCT CGTGGCCGCT CACGCTCGAA GTGGTGATAT GGACGAGGCA TGCCGCTTGG
TAAGTGTTAT GAAACAGCAT GGATACGTGG AGGATTCGAT CACGTGGCGC GAGCTTCTTT
TGGGCAGCGT TCAGTCGGGT GACATTGAAG CCGCATGGAA GATGTACAAA GAGTCCCGCG
CGTCTGGAAA TGCCGATTCC GAGCGTGCAC TCAACACGAT TCTCGGTCAA ACTTTAGTGC
ATATTAGAAG TCTCACGGAT ATGAAGAACC GATCGAACGG GAAACCGAAC GAGTTCGGCT
CATTTGACGA CGAAGGGGAT TACATTGCCC AGGAATGGAC GGAACGTGCG GTCGCGGCTT
TCCACGAAGC CACGCTCGCT GGAATCAAAC CTCGGGTTGA AACGTTGTCC ACAATGCTCG
CTTGCTTACG TCCACCTTCG ACGGACGAGC AAAATGCAGC TGAGTACAGC GAAGTTGCCC
GAGCCGTGAG TCACGAGACG AGCTCCCATG AAGACGCCGC CAGGTACTAC CCTTCGCAAG
CCCTCATCAT GTACGAAGAA GCTCAAGGCT TGGGTATTGT ACCGAAGTTT AGTCGTGATG
ATGAAGACTT TGTCTACGAT ATCCGAGAGT TCCCACCAGC GGCTGCCGAG GTCATGTTGT
TGACGTGGTT GCGTGTCGTT CGCCGGCGCA CAGACGCGCA TGGATTAGAC GCTACGATAC
CGACTATGAC TATTCGTGTG AGAGCTGACG AAGAAGTCGT TCGAATGATC AAGGAGCAAC
ACATGGATCG AATTGATCAC TCGCTGGGTC GCTTGTGCAA GACTGGAGAA CGGTTGCTGA
CATTATTGCG CCGCCTCCGT ATCAATTACG GTGGTGGCTT GCAGGAGGGC ACTATCGAAT
TGAGTGGCCA CGCGCTCGGT CGATGGCTTC AAGGTTTTGT TCCGGGCGAC TTCGGCAATC
ACACCGGTTC CGTGTTCAGT GAGCATTCAC TTTCGGGCGG GGTGAGAGAC CAAGCGATGC
GCATCCGCGC CAATTCTTTC GGCAGTAAAG ACGACGACGT GTGGACTCCG TCAAAGATGC
GTCAAGCCGC ATTCAATATC CACGATTATT ATGGCAATGA TGATGACGAC CCGTCAGATT
TTGGTGCCAG GCCATTCTAT CCCAAGAACT GGGTATCACA GAGTTACGTG TCGAGCTATG
ATGAGGACGA TGACGACGCC ACAGATCTCG AGCGCATCTT AGGAAGTCGC AAGTAACGTA
CGCACGCGCG CGCAGAAGTA CGTAGATTAT TTTTTTAGGA ATTCAT
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| Protein sequence | MTLGELIDRA GELEAKVDGT RANESEYFYI FRELVRCKRL HDSVDLLKHM KERGVKELGR
RVSHRDFFSA CRSLRVVSVG FEFVDVIESG DIRPYNMLVH ACATAGDLQA ATLAIEKMKN
AGFEPDLQAY TTLLGACSKC GDVERAFEVY AELKRAGFEP NEKTYGSMID AISRDLATSL
KGSRKRRVDS EHVRSTLQSC FMIFEEIKTT NMKLDKIVMN SLLTVCARAA VVPSVRKEAC
EKVAMVHDEM IERGFELDSY AYQALICCAL AEKNYTRAFE YFDEMHDAGI NGTTEVYTVM
IRAYGKLGKA DKAKLIWYAM LEDNIIPDQM SYATMMRLAL LDEDDDFCDE LMTSMRRNRV
RPGPELYSTL TGVAARQGDA SQVEEIMQNA KKRGVVAPIE CYNSLIAAHA RADRPDLAVE
AAGKLEAAGY ELDAISYEGL IFAYAFARDV EEASNMFERL LESGIRPTFP TFNCLVAAHA
RSGDMDEACR LVSVMKQHGY VEDSITWREL LLGSVQSGDI EAAWKMYKES RASGNADSER
ALNTILGQTL VHIRSLTDMK NRSNGKPNEF GSFDDEGDYI AQEWTERAVA AFHEATLAGI
KPRVETLSTM LACLRPPSTD EQNAAEYSEV ARAVSHETSS HEDAARYYPS QALIMYEEAQ
GLGIVPKFSR DDEDFVYDIR EFPPAAAEVM LLTWLRVVRR RTDAHGLDAT IPTMTIRVRA
DEEVVRMIKE QHMDRIDHSL GRLCKTGERL LTLLRRLRIN YGGGLQEGTI ELSGHALGRW
LQGFVPGDFG NHTGSVFSEH SLSGGVRDQA MRIRANSFGS KDDDVWTPSK MRQAAFNIHD
YYGNDDDDPS DFGARPFYPK NWVSQSYVSS YDEDDDDATD LERILGSRK
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